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View Structure Prediction Details

Protein: FBpp0309513
Organism: Drosophila melanogaster
Length: 1201 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309513.

Description E-value Query
Range
Subject
Range
gi|54642904, gi|... - gi|54642904|gb|EAL31648.1| GA17027-PA [Drosophila pseudoobscura], gi|125981175|ref|XP_001354594.1| G...
1006.0 [0..149] [1201..113]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEREREAMS ASLSRLLRTL SSASMSRRHC PLALLQPIPL HQSEIALGSA SSGGSAERCC  60
   61 SSCSDDSNNN ERCKSAERGT AADEVGEEGR EEVELESKED AVEGEQDELE LKRDSSTVNV 120
  121 NVVRANFKCN DMECSLVLGD YVNGFLGSFL SKGLKTNQLV VN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDEKTLRPVA RLKEPRDLFA LPKDKDNDCS QQAPRWPVEC QVIEERIIHI PYVPAVPEPL  60
   61 NAPTGNELKP RPVGEENGIV VFSYSPISAV NYEKPKAKKE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [263-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDESSDESDY SSDSRQDSTP PSRSTPMRLA GGGECAPGKL NSVSKMINNV DNRSTSASLD  60
   61 DNDDYYDDEY DTSGGYCGGS GEAKEKAIIK DLIEAKKKRY QEEAEVTPVG GGTARNSRAA 120
  121 SRSEASKDAS DIDDIWKNNT SEYKPASPRY VLSQFGKNVT KAVIDRIVDH EDLVPPSGSQ 180
  181 KVSNQFAVGP VKLPKTNIAR LEVAFERSAC QDRSKSRLKK KMSSSRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [490-690]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRESTSDEDS SSSSLGNEED EEVDDSDSDA ENTGSGIGLR RILGSYSARL AGGAEKCPCP  60
   61 GSGSVSDTET LVGDESRSRL AGSNGLHQQD VVCSRNRQAQ SRSPLRSVPH THAATVAAAA 120
  121 AALARGRNRD KDGCLGGKDE KNMGMGVGTT GTSSMGTRTS SPVRNNVFRL SKDQHILLNS 180
  181 MTSQETTGTL ISSTSTNQTT T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [691-762]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTNSSQSFLC SDLPQAQFSR SAVGGARFMT NCHPMNPEEY DGLEFESRFE SGNLAKAVQI  60
   61 TPTYYELYLR PD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [763-1201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYTSRSKQWF YFRVRRTRRK MLYRFSIVNL VKSDSLYNDG MQPVMYSTLG AKEKSEGWRR  60
   61 CGDNICYYRN DDESASSSAN EDDEDNSTYT LTFTIEFEHD DDTVFFAHSY PYTYSDLQDY 120
  121 LMEIQRHPVK SKFCKLRLLC RTLAGNNVYY LTVTAPSSNE ENMRRKKSIV VSARVHPSET 180
  181 PASWMMKGLM DFITGDTTVA KRLRHKFIFK LVPMLNPDGV IVGNTRNSLT GKDLNRQYRT 240
  241 VIRETYPSIW YTKAMIRRLI EECGVAMYCD MHAHSRKHNI FIYGCENKRN PEKKLTEQVF 300
  301 PLMLHKNSAD RFSFESCKFK IQRSKEGTGR IVVWMLGITN SYTIEASFGG SSLGSRKGTH 360
  361 FNTQDYEHMG RAFCETLLDY CDENPNKVKR HAKLFKQIKK IRKREKREQK ALKLQKMADQ 420
  421 GCIMNDKLKV KRSVEKSVS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.0
Match: 1kwmA
Description: Carboxypeptidase B; Procarboxypeptidase B
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle