| Protein: | Ndc80-PA |
| Organism: | Drosophila melanogaster |
| Length: | 675 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ndc80-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
284.0 | [0..183] | [670..1796] |
|
Region A: Residues: [1-62] |
1 11 21 31 41 51
| | | | | |
1 MSHLMPRRTS EFRGDVLEER GTADKRQTRA TKRSAATHTP SSSQAAPRRP SASRLPQPLN 60
61 LE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [63-176] |
1 11 21 31 41 51
| | | | | |
1 RDRASQMGVT PKRGHRFVPS TAERAIAPHS DKKWVAERAQ QILEYLHGIQ NSEAPTGLIA 60
61 DLFSRPGGLR HMTIKQFVSI LNFMFHHIWR NRVTVGQNHV EDITSAMQKL QYPY
|
| Detection Method: | |
| Confidence: | 43.30103 |
| Match: | 2igpA |
| Description: | No description for 2igpA was found. |
|
Region A: Residues: [177-546] |
1 11 21 31 41 51
| | | | | |
1 QVNKSWLVSP TTQHSFGHVI VLLDFLMDFL PPLPSSDVVE EEFPFMETME QPSSYLNSMH 60
61 CESTTIMSTT QAHAIQLDED VNGLLFEEAS KCIALWDQEL TNEEAKLQAE TRDQVISKKC 120
121 DLPDRKALDQ LIGDLKTKLQ QLENKLHDPS EDNKLNKLER LTKEHDQLAQ QLAASEEELI 180
181 KKLKLYEQLS AQVEEKQSNL RQQMKYEKRL EQAVNRQKFS AQQLKELQMK CDDMENYSKA 240
241 YERQVKEVSE LELHQQVMLS RAKQKQLDSV EVFNSHVRHL SMDPVICGLI KSGIGQQSDL 300
301 TLPLNPNQED ISERVQCLEL LGKLLQQHRQ QNIDRRQMLD KQVAKVKSDS IELDTEIATM 360
361 DSQLRAQKQR
|
| Detection Method: | |
| Confidence: | 35.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [547-675] |
1 11 21 31 41 51
| | | | | |
1 LTKMEASYRT KRDMQAQHRQ QLLEDQYDQT ARLDELEKRE KQALEKLEAS KQRNEDLLTA 60
61 AEQFQEQDLK ARQDRLEKCE QKLAKAEDQL LAVESKVNAT QAKLNEVEQK VYSAKLPSFQ 120
121 PVLDAIKNH
|
| Detection Method: | |
| Confidence: | 4.154902 |
| Match: | 2iw5A |
| Description: | No description for 2iw5A was found. |
