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View Structure Prediction Details

Protein: CG1673-PA
Organism: Drosophila melanogaster
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1673-PA.

Description E-value Query
Range
Subject
Range
gi|125983522, gi... - gi|54643842|gb|EAL32585.1| GA14112-PA [Drosophila pseudoobscura], gi|125983522|ref|XP_001355526.1| G...
424.0 [0..7] [443..54]

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Predicted Domain #1
Region A:
Residues: [1-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKMAINAK DIFRNQHRLI RFLEQSIRLC SNQSLKAAQA AQLQQKSSAD FEITASLDAQ  60
   61 YTSAPEPIKH DKNLGHQFRA SQISVRLAAP EQLQPKPDND EELGFGRLFT DHMLKIYYHK 120
  121 SLGGWQRPEI TPLENLVMHP AAKVLHYAVE LFEGMKAYRG VDGKIRIFRP DMNMNRMNLA 180
  181 AQRSGLPTFE GKEFVQCLSR LLSIDSEWVP HTDTASLYIR PTLIGIDPTL GVASSDSALL 240
  241 YTILSPVGSY FKTGSSGAVS LLADPSYVRA WPGGVGNRKM GSNYAPTINV QKEAAAKGLQ 300
  301 QVLWLYGEDH QLTEVGTMNI FMFFVNDQGE QELVTPPLSG LILPGITRDS ILRMTRQWGK 360
  361 FKVSEANITM PMVCELLNQG RLLELFGAGT ACVVSPVNRI SYLGQDLYIP TMEQEKPVHE 420
  421 LIRETLTDIQ YGRVDHPWAV VID

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 2cogA
Description: Crystal structure of oxidized human cytosolic branched-chain aminotransferase complexed with 4-methylvalerate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle