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View Structure Prediction Details

Protein: CG1640-PC, FBpp0...
Organism: Drosophila melanogaster
Length: 568 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1640-PC, FBpp0....

Description E-value Query
Range
Subject
Range
gi|17862964 - gi|17862964|gb|AAL39959.1| SD05601p [Drosophila melanogaster]
380.0 [0..1] [568..1]

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Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRMLIKPAA ATVSAALQQH QRQQQQYVIR RWKSFLHNNS NNANRRAAKS TATATVTAAA  60
   61 TSQRHGTSGD FIQPLDVRRS FSTSHKMPSS SKALTLDNIN PNFIAMEYAV RGPLVIRAGE 120
  121 IEKELEKGVK KPFDQVIRAN IGD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 2hs5A
Description: No description for 2hs5A was found.

Predicted Domain #2
Region A:
Residues: [144-568]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CHAMGQQPLT FLRQLLALTF ETRLLDSPDY PEDVKKRACA ILNGCQGQSV GSYTDSAGLE  60
   61 VVRRQVAQYI EKRDGGIASN WQDIYLTGGA SPGIKSILSM INAEVGCKAP GVMVPIPQYP 120
  121 LYSATISEYG MTKVDYYLEE ETGWSLDRKE LQRSYDEAKK VCNPRALVVI NPGNPTGQVL 180
  181 TRENIEEIIK FAHDNKVLVL ADEVYQDNVY DKNSKFWSFK KVAYEMGDPY RNLEMVSFLS 240
  241 TSKGYLGECG IRGGYMEVLN LDPKVKAMLT KSITAALCST TAGQVAVSAL VNPPQPGEPS 300
  301 YDLYKKERDG ILAALKERAE LVHKALNSFE GYKVNPVQGA MYVFPQIEIP PKAIEAAKAK 360
  361 GMAPDVFYAF ELLETSGICI VPGSGFGQKP GTWHFRSTIL PQTDKLKLMM EKFRVFHAEF 420
  421 MKKYK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.30103
Match: 1xi9A
Description: Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle