| Protein: | dmrt11E-PA |
| Organism: | Drosophila melanogaster |
| Length: | 377 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dmrt11E-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
208.0 | [0..67] | [367..74] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MHFDETRSPN KDVRIGKSQR LAANGRQGTD PESDPLHARC VVPHASTPRG RRIPWGHNDD 60
61 DDDGNHLTLP DSLTATSSCG CQCLNVRAPF HILLVDQQAR MSK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [104-180] |
1 11 21 31 41 51
| | | | | |
1 DASVRICQRE RRLLRTPKCA RCRNHGVISC VKGHKRLCRW RECCCPNCQL VVDRQRVMAA 60
61 QVALRRQQTM EALEATA
|
| Detection Method: | |
| Confidence: | 2.69 |
| Match: | 1lpvA |
| Description: | DM domain of Doublesex (dsx) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.975525623596709 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0369044168296944 | bayes_pls_golite062009 |
|
Region A: Residues: [181-377] |
1 11 21 31 41 51
| | | | | |
1 SSTKSTGVTT ASANNSSSSE GEDSLSSTSP PPAHSHPHSH SHPTSCVSNS SSSSATRQAL 60
61 MAQKRIYKQR LRSLQQSTLH ITAAMEEYKQ RFPTFSSPLM ERMRKRRAFA DPELNHVMEA 120
121 TLGGNALYFA TVAAAAAACA PVHQEQHIYH PMPPTIPLTI PPTNPAMTTP AVTTASTGSG 180
181 KKPKLSFSIE SIMGIST
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
