YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG15747-PA, FBpp...
Organism: Drosophila melanogaster
Length: 387 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15747-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
176.0 [0..2] [387..250]

Back

Predicted Domain #1
Region A:
Residues: [1-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQYGLILP GQQKKVPLKR VERPSIFDEN SDSETDDDPA APQFQPRTGG VSMGPSLMER  60
   61 RVARRQQEKA LAEDPTIFQY DELYDDMDSK REEAKQTKSQ EPRKPKYIGR LMEHAERRKL 120
  121 EKELRIERQV QKDREAEGEM YKDKDTYVTA AYRKKLESIR QMQEQEQRDE YLEAIGDVTK 180
  181 QKDLDGFYRH LYEQKLGGPA QQDVVKPKTA PTTDEVAYKP IKAEAVKHRS YRRRRPSEDE 240
  241 EEQTKSKSDA ASDATKSTDQ TESIPAQAHL TNNIDADSDF SIDDSSDEED EKENEKEKNK 300
  301 LSQIKKEDKD KAPESSEPVK PKEPEASQQS PTKKDDSNAE VNEKDLPVPR VTKPPVDRTL 360
  361 FWRKRTVGEV LAAALARYEE RKRARLQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.221849
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle