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View Structure Prediction Details

Protein: CG1622-PA
Organism: Drosophila melanogaster
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1622-PA.

Description E-value Query
Range
Subject
Range
gi|27370958 - gi|27370958|gb|AAH40127.1| PRPF38B protein [Homo sapiens]
301.0 [0..12] [273..35]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEDYSASSS AGGGKKAGKQ HNTLPFWGNE SSMNLNALIL ANIQSSSYFK VHLFKLKTYH  60
   61 EVVDEIYYQV KHMEPWERGS RKTSGQTGMC GGVRGVGAGG IVSTAYCLLY KLYTLRLTRK 120
  121 QINGLLNHTD SAYIRALGFM YLRYTQPPGD LYDWYEDYLQ DEEEIDVKAG GGQVLTIGQM 180
  181 VYQFMTKLDW FSTLFPRIPV PIQKQIEKRI EQYCREQGVT 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 126.769551
Match: PF03371.6
Description: No description for PF03371.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [221-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VHQLSTGRST AGTGGGPGAA GQDADYQDYP EGGVERGSGG RGGGQAGSRS NAYPQPNNYR  60
   61 NDYDERDYYA AASGSSYGRG RGGYEDYPPA PLPPQMPYGE RERERDRDRD KNKDYDRHRS 120
  121 KHKKKHNHRQ SSRSRSRSRS RSRHRSERHE RKRDGGGYER SSKSRHNEHY EERERRHR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle