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View Structure Prediction Details

Protein: CG3812-PA, CG381...
Organism: Drosophila melanogaster
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3812-PA, CG381....

Description E-value Query
Range
Subject
Range
gi|91092284 - gi|91092284|ref|XP_968475.1| PREDICTED: similar to CG3812 CG3812-PA [Tribolium castaneum]
208.0 [0..5] [275..3]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITMTSFIEL LGLFLLLMLP FLYETNHIFR YYFKFLMYYG IVSFNSIILI PAFLTRPCDV  60
   61 RNLLWASTWC HRVSTLIG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRWELRGKEH LAKDQACIIV ANHQSSLDVL GMFNIWHVMN KCTVVAKREL FYAWPFGLAA  60
   61 WLAGLIFIDR VRGEKARETL NDVNRRIKKQ RIKLWVFPEG TRRNTGALHP FKKGAFHMAI 120
  121 DQQIPILPVV FSSYCTFLND KKKILNSGRI VITTLPPVST EGLTKDDIDV LMERVRSQMI 180
  181 ETFKVTSAEA LHRYKPIKKV GIPAAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 1iuqA
Description: The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [285-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SASTSSTTTT TLASPGTAVT PVADAAVAAA AAVASSSSAY GQPPGYEAGA AKASLLKTL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle