| Protein: | tomosyn-PD, tomo... |
| Organism: | Drosophila melanogaster |
| Length: | 1470 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tomosyn-PD, tomo....
| Description | E-value | Query Range |
Subject Range |
|
|
803.0 | [0..1] | [1470..1] |
|
Region A: Residues: [1-549] |
1 11 21 31 41 51
| | | | | |
1 MKKFTFKGVL DGFRQSVQPQ ATRQEQEIQE QLKADHFTLK KTFRHGFPYS PTSFAFDPVQ 60
61 KLLAIGDKSG YIRILGRPGV DAHAKHEGES ECAVLFAQFL VNEGALVTVT ADDTIHLWSI 120
121 RQKTPRIVQS LKFQRERVTC IHLPVGSKWL YVGTEKGNIH VVHIDTFALS GYIINWNKAI 180
181 EVVRTSHPGA VIALCDNPLD ANKLLIAFEC GLLVLWDLKA KCAELRWQAA EAVKSLAWHY 240
241 EGKYFVSSHT DGSICSWPTK PQAKPQSQVC PHAKINKDGN AEKCKPIYKV DLKSSATGET 300
301 FTIFSGGMPS EKGSKSNCIT VMVGKATTVL EMEHAVCDFI TLCENPWPCE TQEPYAIAVL 360
361 LQYDLVLIDL LTPGFPCFES PYPMDLHESP VTCCTYLTDC PSDLVPAFYS VGRTTTSKKS 420
421 CFSEREWPIS GGEWSPASCS YSEIVITGHQ DGSLKFWDSG AGTLQILYKL KTAKMFEKPR 480
481 SHVAHSHPES DNPLAVHLIF LCSESRRLCV AGAMGQVMLF KFRKVESTSE VLVLEIPILY 540
541 ENFDDIYGT
|
| Detection Method: |  |
| Confidence: | 58.0 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [550-722] |
1 11 21 31 41 51
| | | | | |
1 SPECDFLTGH QVQKAESSDS DKTAECSLKV RNGAQRKPPG FQSQLVCLTT GPNRRNVQVT 60
61 SLCISSSYGL MAYGTEYGLV IIDIIQKICL LSVACPDLYG AHDPYSRTPK SPKRIENKEE 120
121 QSRSPSSDQI NGSGVATAAP QQQQQQQQQL QQSQQQQQQQ LQQQQQQQQQ QQQ
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 2d5lA |
| Description: | No description for 2d5lA was found. |
|
Region A: Residues: [723-864] |
1 11 21 31 41 51
| | | | | |
1 QQQQQQQSLG GDPGDHATST SAGAATLAGS SIYGADDAGA GVASGGVGVG GISSAISGGF 60
61 GGAAEPQQQQ QVSQQLHQLQ QLQQQSQQQQ QSFEASCDPW GGECGGGGAG GSGGGGGASG 120
121 GGGASGAGAQ QHQYQHPHPY PH
|
| Detection Method: | |
| Confidence: | 0.989 |
| Match: | 2iy3B |
| Description: | No description for 2iy3B was found. |
|
Region A: Residues: [865-1090] |
1 11 21 31 41 51
| | | | | |
1 PHPYPHQTSV IQQQQSVTSY ESLKKSKSQG GSTTEHYSKQ QLTATTTTTT TTTIATKYNS 60
61 KQYKQQQQQN NNLNSNQPNN QIAPLVMKKK NNSHIFFYQY TTHTHTNTHF KCNKLDGTFS 120
121 RSRSSSMSSI DMSSSESVTC LAFIESYAKR NDILTLVPTL WIGTSFGSIL TLFITMPERD 180
181 VRKSQPVLIT INGGPVVRLK GSITSMSFLD SYGSIIPYTF ETWRDE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1091-1168] |
1 11 21 31 41 51
| | | | | |
1 KRDNKDRTPT KSSSRTSPTF TPTTANTLSN TSVAGGASAG GGAGGGGGAG GGAASGGAAA 60
61 GGPAGGGAGA GSAAGAAG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1169-1286] |
1 11 21 31 41 51
| | | | | |
1 GVGSGVTSGG GMSSSSASSS GISGSVSTGL ETLTDRQYIV IASEKQTKVF DVANQCCINR 60
61 IQLSEMDFAV KAETITMKDG SCLATYLSNG HLMVHSLPSL KLLLDTDFLP LMELSFQT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1287-1403] |
1 11 21 31 41 51
| | | | | |
1 KCKQGIVDPM LSIWGQQIIV HEDTTQISKI FCFSHKGHGL YMASPTEIQK FTISSEFCQF 60
61 ILEMMGELYT VHEMPEQPKE GFFKGLFGGG AKLLDREELF GEQSGKPNRS VARHIPG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1404-1470] |
1 11 21 31 41 51
| | | | | |
1 PNLEQLGQRA STAASEISRA HQLAMERGEK LNLLEERAER MANTAQDFSG TAHQLMLKYK 60
61 DKKWYQL
|
| Detection Method: | |
| Confidence: | 18.39794 |
| Match: | 1urqA |
| Description: | Crystal structure of neuronal Q-SNAREs in complex with R-SNARE motif of Tomosyn |
Matching Structure (courtesy of the PDB): |
|
