| Protein: | tomosyn-PF, tomo... |
| Organism: | Drosophila melanogaster |
| Length: | 1470 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tomosyn-PF, tomo....
| Description | E-value | Query Range |
Subject Range |
|
|
674.0 | [0..11] | [1470..20] |
|
Region A: Residues: [1-549] |
1 11 21 31 41 51
| | | | | |
1 MKKFTFKGVL DGFRQSVQPQ ATRQEQEIQE QLKADHFTLK KTFRHGFPYS PTSFAFDPVQ 60
61 KLLAIGDKSG YIRILGRPGV DAHAKHEGES ECAVLFAQFL VNEGALVTVT ADDTIHLWSI 120
121 RQKTPRIVQS LKFQRERVTC IHLPVGSKWL YVGTEKGNIH VVHIDTFALS GYIINWNKAI 180
181 EVVRTSHPGA VIALCDNPLD ANKLLIAFEC GLLVLWDLKA KCAELRWQAA EAVKSLAWHY 240
241 EGKYFVSSHT DGSICSWPTK PQAKPQSQVC PHAKINKDGN AEKCKPIYKV DLKSSATGET 300
301 FTIFSGGMPS EKGSKSNCIT VMVGKATTVL EMEHAVCDFI TLCENPWPCE TQEPYAIAVL 360
361 LQYDLVLIDL LTPGFPCFES PYPMDLHESP VTCCTYLTDC PSDLVPAFYS VGRTTTSKKS 420
421 CFSEREWPIS GGEWSPASCS YSEIVITGHQ DGSLKFWDSG AGTLQILYKL KTAKMFEKPR 480
481 SHVAHSHPES DNPLAVHLIF LCSESRRLCV AGAMGQVMLF KFRKVESTSE VLVLEIPILY 540
541 ENFDDIYGT
|
| Detection Method: |  |
| Confidence: | 46.69897 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.79788997337153 | bayes_pls_golite062009 |
|
Region A: Residues: [550-712] |
1 11 21 31 41 51
| | | | | |
1 SPECDFLTGH QVQKAESSDS DKTAECSLKV RNGAQRKPPG FQSQLVCLTT GPNRRNVQVT 60
61 SLCISSSYGL MAYGTEYGLV IIDIIQKICL LSVACPDLYG AHDPYSRTPK SPKRIENKEE 120
121 QSRSPSSDQL NDTTSPDSPS LEFVPEAGET SAHDGVATAT SSR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [713-831] |
1 11 21 31 41 51
| | | | | |
1 PSSPDPVVNS ARETLLSGSA AATAAAAASA AVMMAKSPQR DDAAPKELQD RRKSMSWKTF 60
61 NLKRQLSKVN MKIGGLNVNT DMESLKNSSI FYTPKEVSPE AATPPATEEE ATPEGKEDE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [832-985] |
1 11 21 31 41 51
| | | | | |
1 SLDDGEMATN AGAAAAASPS PAVRGKFRSS TTDSPDEGAS SSIASGIRRV DFEQPAGVEV 60
61 ERPNNLPLAD APAPLKPARQ KFKEKSRDQR LLSVPNIKYQ PRDSRGGARN LKNDVSPLMG 120
121 GGGGGGGVVG ASSGIGGSVA GGKKIHKLDG TFSR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [986-1133] |
1 11 21 31 41 51
| | | | | |
1 SRSSSMSSID MSSSESVTCL AFIESYAKRN DILTLVPTLW IGTSFGSILT LFITMPERDV 60
61 RKSQPVLITI NGGPVVRLKG SITSMSFLDS YGSIIPYTFE TWRDEKRDNK DRTPTKSSSR 120
121 TSPTFTPTTA NTLSNTSVAG GASAGGGA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1134-1288] |
1 11 21 31 41 51
| | | | | |
1 GGGGGAGGGA ASGGAAAGGP AGGGAGAGSA AGAAGGVGSG VTSGGGMSSS SASSSGISGS 60
61 VSTGLETLTD RQYIVIASEK QTKVFDVANQ CCINRIQLSE MDFAVKAETI TMKDGSCLAT 120
121 YLSNGHLMVH SLPSLKLLLD TDFLPLMELS FQTKC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1289-1407] |
1 11 21 31 41 51
| | | | | |
1 KQGIVDPMLS IWGQQIIVHE DTTQISKIFC FSHKGHGLYM ASPTEIQKFT ISSEFCQFIL 60
61 EMMGELYTVH EMPEQPKEGF FKGLFGGGAK LLDREELFGE QSGKPNRSVA RHIPGPNLE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1408-1470] |
1 11 21 31 41 51
| | | | | |
1 QLGQRASTAA SEISRAHQLA MERGEKLNLL EERAERMANT AQDFSGTAHQ LMLKYKDKKW 60
61 YQL
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1urqA |
| Description: | Crystal structure of neuronal Q-SNAREs in complex with R-SNARE motif of Tomosyn |
Matching Structure (courtesy of the PDB): |
|
