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View Structure Prediction Details

Protein: CG2543-PA
Organism: Drosophila melanogaster
Length: 572 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2543-PA.

Description E-value Query
Range
Subject
Range
gi|21430898 - gi|21430898|gb|AAM51127.1| SD24313p [Drosophila melanogaster]
381.0 [0..1] [572..1]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAACLLRYLV RQSRKPRSLV VSRESSHCSR MSTYSTVTNL STVKMQRIQH LAAFRSGVSL  60
   61 AERVLNPPQQ SINGNHVSGN IQCSSDNNNK DTN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-572]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAFELAIKQL NSLQSNDAAI RNSMSNSRVD TKADTIKYLE RSGLPLETVE QLSFIHVAGT  60
   61 KGKGSTCALT ESLLRHQGFR TGFFSSPHIL FTNERIRIDG QLLSKDKFTE QFWKVYNRLW 120
  121 DLREHDHDMP AYFKFLTILG FHVFVAENVD VVVLEVGIGG EHDCTNIVRN VRTVGITSLG 180
  181 LEHTELLGRT LPEIAWQKAG IIKTGSHVFT HVTQPECLEV IRQRTKEHSA TLYEVPPTED 240
  241 YFRSKAYAPI WQTFSNLIRL NGSLAIQLAQ DWLSQSGKQQ HTPNEVKMDP QLLDGLISTH 300
  301 WPGRCQLIEW HGMRLHLDGA HTLESMEVCT DWFEKNVRDS VNPKILIFNR TGESGFAPLL 360
  361 KLLNRTCDFD MVCFVPNLAT STPNAPSQVM VRFSPEMQLN RARIIASAWS DLCATEQKKD 420
  421 VGQVYNTLTD AFTAIRQRFP QATDNEGQLE VLVTGSIHLL GAAISALDLI DDPKSRTDK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.39794
Match: 1w78A
Description: E.coli FolC in complex with DHPP and ADP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle