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View Structure Prediction Details

Protein: Cpr11A-PA
Organism: Drosophila melanogaster
Length: 270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr11A-PA.

Description E-value Query
Range
Subject
Range
AGAP010123-PA - CPR131: cuticular protein RR-2 family (CPR131)|protein_coding|3R:49239861:49240502:1|gene:AGAP010123
gi|119114473, gi... - gi|119114473|ref|XP_001238133.1| cuticular protein 131, RR-2 family (AGAP010123-PA) [Anopheles gambi...
125.0 [0..2] [156..3]
gi|119114481, gi... - gi|119114481|ref|XP_319281.3| cuticular protein 99, RR-2 family (AGAP010127-PA) [Anopheles gambiae s...
gi|2961115, gi|2... - gi|2961121|gb|AAC05663.1| putative pupal-specific cuticular protein CP2b [Anopheles gambiae], gi|296...
124.0 [0..2] [167..3]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFLILLGF AALAAADVKH LTDRNLDLFK YNPSDIYTLP EDIDDDKPAV HFSGDVMKAK  60
   61 TETLQNYNSG KKFKLELKTQ NGIEVSSVGK LKDDKTFVVS GSYSFTGADG KRYKTRYTAD 120
  121 EFGYHPITEL DLDIPEPQP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 18.79588
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [140-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LASAGQRQTV DPSSLLGNKN RFQFLQQTLD SDQGSQGPLR GSGQSGDDYS YTSPYGNGNA  60
   61 YGNGVGNGYG NGVGNGYGNG VGNGQGNGAG NAYGNGNGVG NGYGNGNGNG YDYQPPQVPL 120
  121 ATPSRLYLPT A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle