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View Structure Prediction Details

Protein: m-PA
Organism: Drosophila melanogaster
Length: 682 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for m-PA.

Description E-value Query
Range
Subject
Range
gi|108882080, gi... - gi|157129733|ref|XP_001655479.1| hypothetical protein AaeL_AAEL002513 [Aedes aegypti], gi|108882080|...
478.0 [0..24] [682..14]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSPQKGPTR LWDLRFSSCI FILHLMFSLV IAGNELWPME RPDGMPNIVS LEVMCGKDHM  60
   61 DVHLTFSHPF EGIVSSKGQH SDPRCVYVPP STGKTFFSFR ISYSRCGTKP D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [112-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNGQFYENTV VVQYDKDLLE VWDEAKRLRC EWFNDYEKTA SKPPMVIADL DVIQLDFRGD  60
   61 NVDCWMEIQH GKGPWAPPVS GIVPLGSTLT LVVAINDYRG EFDMRVKSCV ASDGSGHVIN 120
  121 LSDEFGCVLR PKMISRFLKA RAPDERATVI TYAFFHAFKF PDALSVHIKC KVEICRHGCL 180
  181 DHCQNTGVGG GGGGSGESLG LGLGLG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [318-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTNANERKDV HMSDALGSSS NDLLRDLALP PGGQHGMGMG MGPDHDIFYE DIIHDHKQTL  60
   61 GGGGM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [383-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAGGDYGHEK SVNLQPRPVH EEQEEADLSD LFGDEDLADL DMEGGEGERY LGLKKSGKFP  60
   61 HGPRQLEAQK RMGVPMAGPR SLEPHGHGDE DVPRPVYRPQ AEALKQPRED HIDLDKEEEE 120
  121 EKEKEEKTQQ EDKLTGEGGA AASNDSSKSR RRRSLVISDR KVRSADVGVS GLYDVISEAD 180
  181 LAFSPDS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [570-682]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQEAVTVFQG KISEEVVYGI CMPVPGFSIL FIVVISTTIV SALVAGSLLY RYQLQKEALE  60
   61 KQTPMPVTGT LASWMTLRLF RLRHMQQQQQ QQQQQQQQQQ QVRQPSSGHE TVQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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