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View Structure Prediction Details

Protein: gi|51092210, gi|...
Organism: Drosophila melanogaster
Length: 241 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51092210, gi|....

Description E-value Query
Range
Subject
Range
gi|125983138, gi... - gi|54643648|gb|EAL32391.1| GA15371-PA [Drosophila pseudoobscura], gi|125983138|ref|XP_001355334.1| G...
256.0 [0..20] [241..20]
gi|16768728 - gi|16768728|gb|AAL28583.1| HL06663p [Drosophila melanogaster]
191.0 [0..143] [241..1]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQQRQQLLQ RQHLQLQQLE ANNRFQEVFA TATIIQAHPH PHPHPREPPK KPLLGPYSPQ  60
   61 PGNISHAMGG DQLDAETEQG HMPLILDTSP PVEVTGMGHL KRKTHRGHYK HHRARAGGQK 120
  121 KLSIANSMAS STPSTTAG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.421 d.19.1 MHC antigen-recognition domain
View Download 0.421 d.19.1 MHC antigen-recognition domain
View Download 0.396 a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.396 a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.201 d.110.4 SNARE-like

Predicted Domain #2
Region A:
Residues: [139-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDASMATAAT LPHGYMDAPL NPAAGTIVQA PQLQLYTSMP IPLILSPSDE KRPSHHAHGH  60
   61 VHGERRNGAQ SGGRRRTTTA SVSGYEAQTY LNPFLTGELI FEK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.238 N/A N/A g.7.1 Snake toxin-like
View Download 0.238 N/A N/A g.7.1 Snake toxin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle