YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG1837-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 416 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1837-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|54643650, gi|... - gi|54643650|gb|EAL32393.1| GA14908 [Drosophila pseudoobscura pseudoobscura], gi|125983142|ref|XP_001...
gi|54643650|gb|E... - GA14908-PA [Drosophila pseudoobscura], GA14908 [Drosophila pseudoobscura pseudoobscura]
330.0 [0..1] [416..1]

Back

Predicted Domain #1
Region A:
Residues: [1-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTRSILSVA VCGLLLSPLL PITRASQEED TGKQDKQFTV ELDPETFDTA IAGGNVFVKF  60
   61 FAPWCGHCKR IQPLWEQLAE IMNVDNPKVI IAKVDCTKHQ GLCATHQVTG YPTLRLFKLG 120
  121 EEESVKFKGT RDLPAITDFI NKELSAPAEA DLGEVKREQV ENLNIGKVVD LTEDTFAKHV 180
  181 STGNHFVKFF APWCSHCQRL APTWEDLAKE LIKEPTVTIS KIDCTQFRSI CQDFEVKGYP 240
  241 TLLWIEDGKK IEKYSGARDL STLKTYVEKM VGVPLEKTAG EAGDEKVVIE EVAGEEDAAK 300
  301 KLTPQQLTGE DEFDQAIAEG VAFIKFYAPW CGHCQKLQPT WEQLATETHQ AQSSVKIAKV 360
  361 DCTAPENKQV CIDQQVEGYP TLFLYKNGQR QNEYEGSRSL PELQAYLKKF LGHDEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.221849
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle