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View Structure Prediction Details

Protein: Amun-PE, Amun-PA...
Organism: Drosophila melanogaster
Length: 550 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Amun-PE, Amun-PA....

Description E-value Query
Range
Subject
Range
gi|157112532, gi... - gi|157112532|ref|XP_001651823.1| hypothetical protein AaeL_AAEL006178 [Aedes aegypti], gi|108878044|...
328.0 [0..1] [228..1]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNGKATVSF FETGSTKQFE YCYQLYPQVL KLKAEKRCKK PQELIRLDQW YQNELPKLIK  60
   61 ARGKDAHMVY DELVQSMKWK QSRGKFYPQL SYLVKVNTPR AVIQETKKAF RKLPNLEQAI 120
  121 TALSNLKGVG TTMASALLAA AAPDSAPFMA DECLMAIPEI EGIDYTTKEY LNFVNHIQAT 180
  181 VERLNAEVGG DTPHWSPHRV ELALWSHYVA NDLSPEMLDD MPPPGSGAST GTGSLSTNGN 240
  241 SS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.982
Match: 1pu6A
Description: Crystal structure of H.pylori 3-methyladenine DNA glycosylase (MagIII)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.56582847300391 bayes_pls_golite062009
hydrolase activity 0.117676815156889 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [243-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVLDGDDTND GVGVDLDDES QGAGGRNTAT ESETENENTN PAALTPLQSG EAKNNAAAVG  60
   61 AALQDGDSNF VSNDSTSQEP IIDDND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [329-550]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTTQTTATTS TEDGEPIALD IGIGIGSSGT PLASDSESNQ EAPPKTNSLP ILTPTQHSSQ  60
   61 NQNQKQSPSQ PHKTNNSITN NGQPAPLAEE EAVTAAPQPA SKATAAPANG NGNGNGVLGD 120
  121 EDEDEAEDEE EDELDEEEDN EAELEADESN SSNGIVRDSK LQQLAANKAV DAVSPVAAGA 180
  181 DSAPAIGQKR TALHCDMELK NAGGVGVGVG EKSPDLKKLR SE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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