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View Structure Prediction Details

Protein: bif-PC
Organism: Drosophila melanogaster
Length: 1108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bif-PC.

Description E-value Query
Range
Subject
Range
gi|14334990 - gi|14334990|gb|AAK59373.1| protein phosphatase 1-binding protein Bifocal [Drosophila melanogaster]
467.0 [0..1] [1105..1]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESQKRPSLD LHTDVPAGLA AGGSGLGAAA EMSPTSGFLP DMPQWKKDLI QRRKTNVART  60
   61 QAASITSPTD GSCGALAEAN AAPGAIADFT EPATISSTSQ KRNMIGSEEK SEKSSISNTN 120
  121 SDSTGGHHSV VAVSLSPDAA ATTNVTVTPI PKQRSSLLNT RSQEREMVRY ILSESGERDG 180
  181 ELE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [184-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGEQPAGVVS NSRCGEVETG TIGSPSSSAN QNPNPNHLKT KCKPGQSVAE GKPSAKETIV  60
   61 DNSKSCSKTK SISDKLQSNK FIIQQQQQQQ QQQQQQQQLS PTKVTVKPTM VAMQEMKKTT 120
  121 KQNGQHRHLA GKIGSVAGGD VDPQHPPTNP IPDSLDTGED LSYGPGIVSK LRCRYLSLAL 180
  181 RESRQQSSKQ RLQRSTSLNT LLDRDDDEVE VEEPEMTNSQ VRAKSTPPPI LGAKPT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [420-625]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKPSSQHQRP VSLGANGAGS AVNPPSNSDQ AQTGAVANGG AGSGQRSRHF KRGNEVMKRA  60
   61 RSVEALLCEK SPWNSQRIST AGAAAAAAPS PPAPKATAAA PSPVTSPTCV TIEDKIHNAR 120
  121 ERLHSGTDTA PPKRLTSIID DTERPPPDLV KQTLKMFEAS ANRRPRAAHR SNGVGGVASK 180
  181 VANYKSIIKD QKQPSSAAAT PPPTGM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [626-771]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFASSTPLRH VHPDIIPRQV DSPVSALSVM MRRMELQEPE TPERETRDAE ATPQSEALSE  60
   61 TERNDRDEGD GEVDDDNHNN NDDDHDDGDD GSDNNEQRDK MGAAAAGDKP KPPAESAAGG 120
  121 AQRSFAASTE NAHVASGSSS STSASV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [772-950]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKLSNNNDSS SGPAVTKQIG VIRPLFNSQG AGSTPLTSRE IEKNRINEMK KSTATDAGGS  60
   61 VSGSGTVAGA GSGTSPTTSL DSVINTKEAA SSETDASASP LWTLRKLRNQ SQTAGGGSGP 120
  121 SSSLHSTENT SMVFNFSKST KEVPDYIESD VVIYRRKREL PKPNEPGFVL LGDLSVETS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [951-1020]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDTDYDDYSM CPPSPCDVEF ENANIVIDGK SSIRQKPKES SFRVQFNDTL TSTFEYPSEA  60
   61 SMTIEDPPYA 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1021-1108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPFGHVSKHH QMLLAEQMHL LQHQEQLELE QMHQLGLAPE QHHHVTVDEI IELPTSTAGH  60
   61 GHGIGLGHRS GAAGGGGTML GNLPLDII

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle