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View Structure Prediction Details

Protein: CG1703-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 901 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1703-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|39996744, gi|... - gi|39996744|ref|NP_952695.1| putative ABC transporter ATP-binding protein [Geobacter sulfurreducens ...
474.0 [0..347] [901..5]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKAKGKKKE RFDDDEEQLE KVQEKKPPTS KKGGKKGKRG GGGGDSSDED VTTRNRDNED  60
   61 LESIASSNQS KQQTAGKKQA KKGKKGKRNN DWSDEDEKPE KSLPANDLDD EDDDEAPLAS 120
  121 KPAAKKPQPS KKNK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNKKKNDDFS DEDKPELDLD DLDNEEDEVE VVAVKPASKK SKKKQQAQQK NMFAMSDDEE  60
   61 DEVADDLPND SEEEEKEQLS NKAAKESKKE QQKQPEKEVE EQKVEQVLSE KVAAVSLKEK 120
  121 TPEPVPKAEP EPESEPQPDE EADAEVDSKF EESKEAKEKK LTHKEKKKQK KQQEYERQME 180
  181 LMTKKGGAGH SDLDNNFTMS QVQKSAGQKA ALEQA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [350-792]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDIKIENFTI SAKGNDLFVN ANLLIAHGRR YGLVGPNGHG KTTLLRHIAT RAFAIPPNID  60
   61 VLLCEQEVVA TDKTAINTIL EADVRRTEML KKADELEKQF VAGDLTVQEE LNDTFAELKA 120
  121 IGAYSAEARA RRILAGLGFS KEMQDRPTNK FSGGWRMRVS LARALYLEPT LLMLDEPTNH 180
  181 LDLNAVIWLD NYLQGWKKTL LIVSHDQSFL DNVCNEIIHL DQKKLQYYKG NYSMFKKMYV 240
  241 QKRREMIKEY EKQEKRLREL KAHGQSKKAA EKKQKESLTR KQEKNKSKQQ KQDEDEGPQE 300
  301 LLARPKEYIV KFRFPEPSQL QPPILGVHNV TFAFPSQKPL FIKVDFGIDL TSRVAIVGPN 360
  361 GVGKSTFLKL LLGELEPQEG EQRKNHRLHV GRFDQHSGEH LTAEESAAEY LQRLFNLPHE 420
  421 KARKALGSFG LVSHAHTIKM KDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.30103
Match: 2iw3A
Description: No description for 2iw3A was found.

Predicted Domain #4
Region A:
Residues: [793-901]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGGQKARVAL AELCLSAPDV LILDEPTNNL DIESIDALAE AINEYEGGVI IVSHDERLIR  60
   61 ETGCTLYVIE DQTINEIVGE FDDYRKEVLD SLGEVVNNPS VVANAAVLQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.221849
Match: 2hydA
Description: No description for 2hydA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle