YRC Public Data Repository - Protein Structure Prediction

Protein:	e(y)2-PA
Organism:	Drosophila melanogaster
Length:	101 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for e(y)2-PA.

Description	E-value	Query Range	Subject Range
gi\|50731850 - gi\|50731850\|ref\|XP_418387.1\| PREDICTED: similar to e(y)2 protein; DC6 protein; e(y)2 homolog; enhanc...	136.0	[0..3]	[92..236]
gi\|109087263 - gi\|109087263\|ref\|XP_001087516.1\| PREDICTED: similar to e(y)2 protein [Macaca mulatta]	128.0	[0..3]	[89..62]
gi\|114621341 - gi\|114621341\|ref\|XP_001135431.1\| PREDICTED: similar to DC6 [Pan troglodytes]	124.0	[0..3]	[89..40]
ENY2_MOUSE - Transcription and mRNA export factor ENY2 OS=Mus musculus GN=Eny2 PE=1 SV=1 gi\|149721612 - gi\|149721612\|ref\|XP_001495477.1\| PREDICTED: similar to mCG145920 isoform 1 [Equus caballus] gi\|109482159, gi... - gi\|194474074\|ref\|NP_001124052.1\| enhancer of yellow 2 homolog [Rattus norvegicus], gi\|149066438\|gb\|E... ENSMMUT000000085... - null, null ENSCJAT00000012432 - null ENY2 - enhancer of yellow 2 homolog (Drosophila) gi\|57095302, gi\|... - gi\|73974326\|ref\|XP_860311.1\| PREDICTED: similar to e(y)2 protein isoform 5 [Canis familiaris], gi\|73... tr\|M3XCF2\|M3XCF2... - Transcription and mRNA export factor ENY2 OS=Felis catus GN=ENY2 PE=3 SV=1 ENSPTRT00000037945 - null ENY2_BOVIN - Transcription and mRNA export factor ENY2 OS=Bos taurus GN=ENY2 PE=3 SV=1 gi\|194035670, gi... - gi\|194035676\|ref\|XP_001926701.1\| PREDICTED: similar to mCG145920 [Sus scrofa], gi\|194035670\|ref\|XP_0...	119.0	[0..3]	[89..12]
sus1 - SAGA complex subunit Sus1 SUS1_SCHPO - Transcription and mRNA export factor sus1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=...	119.0	[0..3]	[95..11]
SUS1_ARATH - Transcription and mRNA export factor SUS1 OS=Arabidopsis thaliana GN=SUS1 PE=3 SV=1	118.0	[0..1]	[87..25]
gi\|215767677, gi... - gi\|215767677\|dbj\|BAG99905.1\| unnamed protein product [Oryza sativa Japonica Group], gi\|115441877\|ref...	117.0	[0..1]	[87..21]
ENY2_XENLA - Transcription and mRNA export factor ENY2 OS=Xenopus laevis GN=eny2 PE=3 SV=1	116.0	[0..7]	[89..11]
gi\|68051677 - gi\|68051677\|gb\|AAY85102.1\| IP03279p [Drosophila melanogaster]	114.0	[0..11]	[89..46]
ENY2_DANRE - Transcription and mRNA export factor ENY2 OS=Danio rerio GN=eny2 PE=3 SV=1	113.0	[0..3]	[89..7]

Back

Predicted Domain #1

Region A:
Residues: [1-101]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSGAVDQY TVLTGDRSKI KDLLCSRLTE CGWRDEVRLM CRNILMEKGT NNSFTVEQLI  60
   61 AEVTPKARTL VPDAVKKELL MKIRTILTEI EEEPDEPEDE S

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.780	a.1.1	Globin-like
View	Download	0.744	a.152.1	Antioxidant defence protein AhpD
View	Download	0.730	a.146.1	Telomeric repeat binding factor (TRF) dimerisation domain
View	Download	0.713	a.186.1	Description not found.
View	Download	0.708	a.146.1	Telomeric repeat binding factor (TRF) dimerisation domain
View	Download	0.701	a.188.1	Description not found.
View	Download	0.650	a.2.3	Chaperone J-domain
View	Download	0.611	a.24.17	Group V grass pollen allergen
View	Download	0.606	a.181.1	Antibiotic binding domain of TipA-like multidrug resistance regulators

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits