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View Structure Prediction Details

Protein: Or10a-PA
Organism: Drosophila melanogaster
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or10a-PA.

Description E-value Query
Range
Subject
Range
gi|54643189, gi|... - gi|54643189|gb|EAL31933.1| GA14703-PA [Drosophila pseudoobscura], gi|125981747|ref|XP_001354877.1| G...
210.0 [0..6] [406..1]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEWLRFLKR DQQLDVYFFA VPRLSLDIMG YWPGKTGDTW PWRSLIHFAI LAIGVATELH  60
   61 AGMCFLDRQQ ITLALETLCP AGTSAVTLLK MFLMLRFRQD LSIMWNRLRG LLFDPNWERP 120
  121 EQRDIRLKHS AMAARINFWP LSAGFFTCTT YNLKPILIAM ILYLQNRYED FVWFTPFNMT 180
  181 MPKVLLNYPF FPLTYIFIAY TGYVTIFMFG GCDGFYFEFC AHLSALFEVL QAEIESMF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [239-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPYTDHLELS PVQLYILEQK MRSVIIRHNA IIDLTRFFRD RYTIITLAHF VSAAMVIGFS  60
   61 MVNLLTLGNN GLGAMLYVAY TVAALSQLLV YCYGGTLVAE SSTGLCRAMF SCPWQLFKPK 120
  121 QRRLVQLLIL RSQRPVSMAV PFFSPSLATF AAILQTSGSI IALVKSFQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle