YRC Public Data Repository - Protein Structure Prediction

Protein:	Gr10b-PA
Organism:	Drosophila melanogaster
Length:	373 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr10b-PA.

Description	E-value	Query Range	Subject Range
gi\|54643190, gi\|... - gi\|54643190\|gb\|EAL31934.1\| GA11723-PA [Drosophila pseudoobscura], gi\|125981749\|ref\|XP_001354878.1\| G...	472.0	[0..6]	[321..1]

Back

Predicted Domain #1

Region A:
Residues: [1-202]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVGKLCRLA LRFWMGLILV LGFSSHYYNP TRRRLVYSRI LQTYDWLLMV INLGAFYLYY  60
   61 RYAMTYFLEG MFRRQGFVNQ VSTCNVFQQL LMAVTGTWLH FLFERHVCQT YNELSRILKH 120
  121 DLKLKEHSRF YCLAFLAKVY NFFHNFNFAL SAIMHWGLRP FNVWDLLANL YFVYNSLARD 180
  181 AILVAYVLLL LNLSEALRLN GQ

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [203-373]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEHDTYSDLM KQLRRRERLL RIGRRVHRMF AWLVAIALIY LVFFNTATIY LGYTMFIQKH  60
   61 DALGLRGRGL KMLLTVVSFL VILWDVVLLQ VICEKLLAEE NKICDCPEDV ASSRTTYRQW 120
  121 EMSALRRAIT RSSPENNVLG MFRMDMRCAF ALISCSLSYG IIIIQIGYIP G