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View Structure Prediction Details

Protein: rtv-PA, FBpp0312...
Organism: Drosophila melanogaster
Length: 151 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rtv-PA, FBpp0312....

Description E-value Query
Range
Subject
Range
gi|108882135, gi... - gi|157167625|ref|XP_001655277.1| hypothetical protein AaeL_AAEL002438 [Aedes aegypti], gi|108882135|...
220.0 [0..15] [151..14]
gi|54643021, gi|... - gi|54643021|gb|EAL31765.1| GA12667-PA [Drosophila pseudoobscura], gi|125981413|ref|XP_001354710.1| G...
216.0 [0..1] [141..1]
gi|116122797, gi... - gi|118789906|ref|XP_317897.3| ENSANGP00000020005 [Anopheles gambiae str. PEST], gi|116122797|gb|EAA1...
207.0 [0..24] [123..13]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFTSLLLAV IFLISLVSID GLLRRCYQCR SRGELGSCKD PFTFNATDVE QEPGVAAIPC  60
   61 ASGWCGKVIE GGGTYAIDDY DLAIQRMCVQ RGPDDNMDRC ADTIYNYKKV YMCFCQGDLC 120
  121 NGARSWSSAP QMILITMLPL LGSWLLQRMR N

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1nysA
Description: Type II activin receptor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle