YRC Public Data Repository - Protein Structure Prediction

Protein:	Gr9a-PA
Organism:	Drosophila melanogaster
Length:	341 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr9a-PA.

Description	E-value	Query Range	Subject Range
gi\|54642726, gi\|... - gi\|54642726\|gb\|EAL31471.1\| GA17078-PA [Drosophila pseudoobscura], gi\|125980791\|ref\|XP_001354418.1\| G...	525.0	[0..4]	[319..5]

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Predicted Domain #1

Region A:
Residues: [1-102]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLWLEHFLT GYFQLCGLVC GWSGSRLGRL LSSTFLVLIL IELVGEIETY FTEENPDNES  60
   61 VPAYFAKVIM GVNMAYKMIH AWIALSALFE CRRFRYLLEE LP

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [103-341]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVKATSFIYR HLILEIILFA CNAFLVLSEY TIRGIYLENL RYAYSLQAVR ARYLQMMVLV  60
   61 DRLDGKLEQL HHRVISGSSD YKTLRLDYAH LAKVTRSLSH LFGLSLLLLN VLCLGDWIIV 120
  121 CNVYFMVAYL QVLPATLFLF GQVMFVVCPT LIKIWSICAA SHRCVSKSKH LQQQLKDLPG 180
  181 QTPVERSQIE GFALQIMQDP IQIDVCGIYH LNLQTLAGMF FFILEALVIF LQFVSLVRT