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View Structure Prediction Details

Protein: Gr8a-PA
Organism: Drosophila melanogaster
Length: 385 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr8a-PA.

Description E-value Query
Range
Subject
Range
gi|51890537, gi|... - gi|51890751|dbj|BAD42787.1| gustatory receptor for trehalose [Drosophila melanogaster], gi|51890727|...
161.0 [0..3] [377..51]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGHLGRVLQ FHLRLYQVLG FHGLPLPGDG NPARTRRRLM AWSLFLLISL SALVLACLFS  60
   61 GEEFLYRGDM FGCANDALKY VFAELGVLAI YLETLSSQRH LANFWWLHFK LGGQKTGLVS 120
  121 LRSEFQQFCR YLIFLYAMMA AEVAIHLGLW QFQALTQHML LFWSTYEPLV WLTYLRNLQF 180
  181 VLHLELLREQ LTGLEREMGL LAEYSRFASE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [211-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGRSFPGFES FLRRRLVQKQ RIYSHVYDML KCFQGAFNFS ILAVLLTINI RIAVDCYFMY  60
   61 YSIYNNVINN DYYLIVPALL EIPAFIYASQ SCMVVVPRIA HQLHNIVTDS GCCSCPDLSL 120
  121 QIQNFSLQLL HQPIRIDCLG LTILDCSLLT RMACSVGTYM IYSIQFIPKF SNTYM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle