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View Structure Prediction Details

Protein: FBpp0298284, Corp-PA
Organism: Drosophila melanogaster
Length: 213 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0298284, Corp-PA.

Description E-value Query
Range
Subject
Range
gi|195165611, gi... - gi|195165611|ref|XP_002023632.1| GL19909 [Drosophila persimilis], gi|194105766|gb|EDW27809.1| GL1990...
gi|125981255, gi... - gi|54642945|gb|EAL31689.1| GA10673 [Drosophila pseudoobscura pseudoobscura], gi|125981255|ref|XP_001...
gi|54642945|gb|E... - GA10673-PA [Drosophila pseudoobscura], GA10673 [Drosophila pseudoobscura pseudoobscura]
238.0 [0..1] [213..1]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADIRSSLKV LFQGETNLIT CGSSNTYEEV ISQAMTRFAI PETQRKALIL TNGKDYVFEA  60
   61 HLLEYFLLLF PCPEITFHLR FDWSKMRRSL GQTESLKRKR LVDLEQAEGQ KEEDQEKEDP 120
  121 VPEYKPVPVY RMNCFLGSLP TAGAIPVHRQ NCFLREQSQQ QLDEISIPRL QEDDDQKEPP 180
  181 KKRQRVDVCS KPRRTASTSV GPSPVPVMRS IRI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.974
Match: 1xeqA
Description: Crystal tructure of RNA binding domain of influenza B virus non-structural protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle