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View Structure Prediction Details

Protein: Trxr-1-PC
Organism: Drosophila melanogaster
Length: 508 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Trxr-1-PC.

Description E-value Query
Range
Subject
Range
Trxr-1-PB - The gene Thioredoxin reductase-1 is referred to in FlyBase by the symbol Dmel\Trxr-1 (CG2151, FBgn00...
377.0 [0..7] [508..96]

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Predicted Domain #1
Region A:
Residues: [1-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKYMICAIV VGAKKSTSSK YNGSYDYDLI VIGGGSAGLA CAKEAVLNGA RVACLDFVKP  60
   61 TPTLGTKWGV GGTCVNVGCI PKKLMHQASL LGEAVHEAAA YGWNVDEKIK PDWHKLVQSV 120
  121 QNHIKSVNWV TRVDLRDKKV EYINGLGSFV DSHTLLAKLK SGERTITAQT FVIAVGGRPR 180
  181 YPDIPGAVEY GITSDDLFSL DREPGKTLVV GAGYIGLECA GFLKGLGYEP TVMVRSIVLR 240
  241 GFDQQMAELV AASMEERGIP FLRKTVPLSV EKQDDGKLLV KYKNVETGEE AEDVYDTVLW 300
  301 AIGRKGLVDD LNLPNAGVTV QKDKIPVDSQ EATNVANIYA VGDIIYGKPE LTPVAVLAGR 360
  361 LLARRLYGGS TQRMDYKDVA TTVFTPLEYA CVGLSEEDAV KQFGADEIEV FHGYYKPTEF 420
  421 FIPQKSVRYC YLKAVAERHG DQRVYGLHYI GPVAGEVIQG FAAALKSGLT INTLINTVGI 480
  481 HPTTAEEFTR LAITKRSGLD PTPASCCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 102.0
Match: 2nvkX
Description: No description for 2nvkX was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle