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View Structure Prediction Details

Protein: FBpp0308752, CG1...
Organism: Drosophila melanogaster
Length: 637 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308752, CG1....

Description E-value Query
Range
Subject
Range
gi|125981511|ref... - GA13933-PA [Drosophila pseudoobscura], GA13933 [Drosophila pseudoobscura pseudoobscura]
gi|125981511, gi... - gi|54643070|gb|EAL31814.1| GA13933 [Drosophila pseudoobscura pseudoobscura], gi|125981511|ref|XP_001...
525.0 [0..1] [637..1]

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Predicted Domain #1
Region A:
Residues: [1-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGHHKKNLR AEKAKVKLKG AKLPKGLNVT KTDFKVRKIE IREQLKESSY SETGQRQFNL  60
   61 KETLSRLKHH SVKFRTDAQR NVRDSLKSGN ADHLIGHLNE LFQGIAAGAL DMEGSARKES 120
  121 FKTLDVLLEA LQPQAVAPFF HVIATYLRCA MTHVLPAIQE DSLLMLDVLL LRVPPAFLAE 180
  181 RSASTIIGNF IDMISRARHD NERSNRTLTL NLSQGKQTTV KWRTKVLIRL QQILSTLVTS 240
  241 KTPKSAAARV VHFEEMRPQY YNVLCPVRHD NRNLHAILNE SKLTAEGTQL HTYVEQLLPL 300
  301 LQDNWMEVRP QQQQPLLNQD AAASLHVVIG LMSLLWNLIE QHEAEHNTTE LSDWLRKNYA 360
  361 QKFLLNFLDK DGSRFPYQQI PLATKNSSKD KGAVDGGELC MPQNLGIVQL ACKFFPTPVE 420
  421 RQTQMFAHLI EYMHETLKRL NSLSPEQQLS LVASLRALLF ENATSLMKIV TEPLTSLLSA 480
  481 SIDAYVSQRF TT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.221849
Match: 2ot8A
Description: No description for 2ot8A was found.

Predicted Domain #2
Region A:
Residues: [493-637]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REGVATRVLN LLCEIVERSD LYTHFGGEQR FTPFLSYLPQ LLLKPTVGES TLRAMATLCR  60
   61 QLNGVFMAAL VRSAPEIVSH LDKLQITGDI EGQEKFENQK RVLNLFYYAR ELDKEGKLER 120
  121 SVKQLEERVE SKGIADYLKA VLGYN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle