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View Structure Prediction Details

Protein: FBpp0309125, FBp...
Organism: Drosophila melanogaster
Length: 717 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309125, FBp....

Description E-value Query
Range
Subject
Range
gi|54643064|gb|E... - GA15329-PA [Drosophila pseudoobscura], GA15329 [Drosophila pseudoobscura pseudoobscura]
gi|125981499, gi... - gi|54643064|gb|EAL31808.1| GA15329 [Drosophila pseudoobscura pseudoobscura], gi|125981499|ref|XP_001...
1201.0 [0..1] [716..1]

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Predicted Domain #1
Region A:
Residues: [1-490]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLSEGSPL SWEETKALAD HVREHGVNQF INLYHRLKDR QGDILKWGDE VEYIIVKFDD  60
   61 EQKVARVALR AQDLLAQLNE KELADPNGVK SLWRPEYGAY MIEGTPGKPF GGLMAHFNLV 120
  121 EANMRYRREE VTELLAKDEC VMSITNFPRL GAPNFTYPLA QPRPEDPLSS ARSLYFPDEA 180
  181 IFPGHPRFKT LTRNIRKRRG EKVSIKLKVF KDTKTKLPVE GAPPGEPDVV LLDAMGFGMG 240
  241 CCCLQLTFQA CNITEARRLY DQLAPLCPIM LALTAASPIY RGYLTESDCR WNVISSSVDC 300
  301 RTEEERGLAP LDQQKFRIAK SRYDSIDSYL SPEGAKYNDV PLTYDEKVYQ RLVEGGIDHL 360
  361 LAQHVAHLFI RDTVSLFSEK VHQNDNEDTD HFENIQSTNW QTMRFKPPPP NSSIGWRVEF 420
  421 RPCEAQISDF ENAAIVCFVV LLTRVILSYQ LNFLTPISKV DENMQTAQKR DACRKEKFWF 480
  481 RKSSKTTEQR 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.52
Match: 2gwcA
Description: No description for 2gwcA was found.

Predicted Domain #2
Region A:
Residues: [491-579]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAKAQAQAQA QAKAQAQTNG KATLNGNGLA NGNGNGSENS DQEEQQPLTN GSAKMNGHGS  60
   61 GTTNGTNGSS NGSSNGTDSD HTDTDDEEN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [580-717]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELFQLLSINE IFNGKPNVFP GLVPLIRSYL QSMEVDTDTH CTIEQYLRFI QKRAAGELIT  60
   61 TATWMREQVL SHPDYKQDSV VSERINYDLL KRIQGIQEGK QVEPALLGQD YHSKTKTKDF 120
  121 IPPALQKQLA KNGCCEEK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle