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View Structure Prediction Details

Protein: FBpp0309126, CG2...
Organism: Drosophila melanogaster
Length: 801 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309126, CG2....

Description E-value Query
Range
Subject
Range
gi|119115148, gi... - gi|119115148|ref|XP_310909.3| ENSANGP00000012709 [Anopheles gambiae str. PEST], gi|116130696|gb|EAA0...
684.0 [0..1] [801..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKALYDFQA VYPKTISFDE GEYFILYQTS ARQRNWWQVV SMKGNIGFVP SNYVMKIKVE  60
   61 HDFLISFLNS SIESLEKCTD HEI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 1g83A
Description: Fyn proto-oncogene tyrosine kinase, SH3 domain; Tyrosine kinase Fyn
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [84-481]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGIMSKDELL DRLREKKHTM ERLYAESSER DGDSSLSYSH SYSDKGSHRH SHPHPTQSQT  60
   61 QLHSQHRQHS PPPSGGSVGS QRLDMSKKSM SSPAVGSSCG LPQNQGMIES PSMGSMQFQG 120
  121 SSCTIQTPQQ QQPLPAPPAP APSPSAASAT PTAASTSKAA TGGDVAQDNS ITSEPSETTT 180
  181 TTTTTSEDVV TTYKETSQMS TSQQHKPQNG STASASISAS ASASALRSNG GNGKANGSAT 240
  241 ALHQELQQEE ADSAPDKSDD ASAVQSDDGC PANGDSADNS QALDSIDSPS HRQRGLSLGR 300
  301 IEEGATGGGQ LKVESSDVYQ IVDALRRNTN LSFDLSCEAL RVVLTSLEQL YNGAINPYLE 360
  361 AVAVHVTGKV ATPKELLGIT HDAKRLQYLF AQLADCKN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.31
Match: 1h1kI
Description: THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [482-628]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTEQRTWMLY EDEEDIIQFL EELVEILINA DESISCYEMS CDQYQMFINL VQYYQMETRW  60
   61 SIKRLLLKTF TAACHLDYII VDILLTSVLP LEIVEDMKTH FSNLDRFKQL VKMLTIIFSL 120
  121 GQPMPVNHQD YLGVHFASFL LEIVEGN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [629-801]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPEVLVDMVI ALILAFNQQF SEHTYNVIIE GMQNLPSAKV FTEKLLLLLN REDDPTRLLK  60
   61 HPNEHMNTVL RMFIDIFSHP DTAGMFYTND IKVLIDIVVR QLSDLDAGST TRPCYLELCR 120
  121 RILRNTNYQE HQHRKHDLMK IFTRIFCEET ECSASDQQLV REIANEFPQL FKA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 67.346787
Match: PF09431.1
Description: No description for PF09431.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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