| Protein: | dec-1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1590 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dec-1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
542.0 | [0..14] | [1590..14] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MRLFSLLPLL ALLVVQAAGQ SEVTSDDPAT DAGSTTNSTT DTKPRIPSQD EILGQMPSIN 60
61 PIRTGNPQMD AFYMMFPALG SLLKWGSLFP AYSILGAIPD NLQPTAAASK VVLVLADDAT 120
121 AKTRVA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [127-198] |
1 11 21 31 41 51
| | | | | |
1 RQNPPPNPLG QLMNWPALPQ DFQLPSMDLG PQVGSFLAQL PAMPTVPGLL GAAAPVPAPA 60
61 PAPAAAPPPA PA
|
| Detection Method: | |
| Confidence: | 0.965 |
| Match: | 1pk8A |
| Description: | Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [199-596] |
1 11 21 31 41 51
| | | | | |
1 PAADPPAAPV PDAPQPAILG QAALQNAFTF FNPANFDASS LLGQSVPTFA PPNLDFVAQM 60
61 QRQFFPGMTP AQPAAAGTDA QASDISEVRV RPEDPYSQEA QMKIKSALEM EQERQQQAQV 120
121 KDQEQVPLLW FRMPTTQNQD ATEEKTLEDL RVEAKLRAFE RQVIAELRML QKIELMAKQM 180
181 RSSAAAQNGD SPYRISYPLS RTPIHKITRA DIEQALRDDY VRRLVNKEAQ RRARNSGINT 240
241 QKANALKRQA KSQDQTLSKE DIVQIMAYAY RMANEQMESE KGKQDKVYAA YRTEQNPMMM 300
301 QQRQWSEEQA KIQQNQQQIQ QNPMMMQQRQ WSEEQAKIQQ NQQQIQQNPM MMQQRQWSEE 360
361 QAKIQQNQQQ IQQNPMMMQQ RQWSEEQAKI QQNQQQIQ
|
| Detection Method: | |
| Confidence: | 16.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [597-734] |
1 11 21 31 41 51
| | | | | |
1 QNPMMVQQRQ WSEEQAKIQQ NQQQIQQNPM MMQQRQWSEE QAKIQHDQQM AQQMAQQGLM 60
61 MTEQRQRQWS EDQAKIQQAQ QMAQQTPMMM PQMQQRQWTE DPQMVQQMQQ RQWAEDQTRM 120
121 QMAQQNPMMQ QQRQMAEN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [735-900] |
1 11 21 31 41 51
| | | | | |
1 PQMMQQRQWS EEQTKIEQAQ QMAQQNQMMM QQMQQRQWSE DQAQIQQQQR QMMQQTPMMM 60
61 KERQWAEENP QSVQQQGPMM MQQQMPSMMQ REVEDEDNKA EDDLVGEAGP QMPENEGTAR 120
121 HKVDALGVGG NKRKKSKSKS APPTVINYYY AAPQRPVVQS YGTSYG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [901-990] |
1 11 21 31 41 51
| | | | | |
1 GGGYGSNAYG VPRPVNSYQS QGYRAAVGND EVDEMLRQHQ TMARTINPKQ PGEVGGSESQ 60
61 KSNSNPPTTL TPAPQEQPQE HRVHKRLAHF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [991-1079] |
1 11 21 31 41 51
| | | | | |
1 HRFGREAGLN ATTSKGCGCG RLDCLCGRSC RCGRRGLESR VVSSRTSGTC QCKASHRNKR 60
61 SVEYGTLETI DEGSLNELRR EYKLGLKEI
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 1asyR |
| Description: | CLASS II AMINOACYL TRANSFER RNA SYNTHETASES: CRYSTAL STRUCTURE OF YEAST ASPARTYL-TRNA SYNTHETASE COMPLEXED WITH TRNA ASP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1080-1359] |
1 11 21 31 41 51
| | | | | |
1 TLSPDEDPAE ALMRYNAASI REALERASME PLEIGGDQYE EDAQQEPMEE EQLQHDPNTE 60
61 PQYNHKDFVR LTTSTASPIT STTEAATPTG SDSTSEATVT PEVTTTTSTS TTTTTESTKD 120
121 EGLDMQQDSQ AEAESSHVTK SISKQEAEIH QLHSIVEELK NEILKLNLRC STIISNNVAK 180
181 EPVTEKNPPV VEEPSKQEDK PKVEEKVIAE EQAPVEQEEE LEEDEDSTSI STTTETPSPS 240
241 GSYSTKPGLS LGSPRVDEQS GSSNKLDYDD DNNWQRILAN
|
| Detection Method: | |
| Confidence: | 7.39794 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1360-1590] |
1 11 21 31 41 51
| | | | | |
1 RGYDTDYLTK SHERQFAQGQ NLEMPKNCNY DGNGSQEYGP YPEFQADEPS TDTEGKAKRA 60
61 LSVKQQAQLL NAALNDSGSD SSDGTTTTTT PSPYAMRGKF VRRRSTARRV PIPKIGKASD 120
121 EVWVRSPRQA KMPQRPKKSM SKPKKQSSQV TTQATVSSTK LDSLVDVLKD LVRLQIQKEK 180
181 KSSLLRTQSN NLSKTKPKSI KPVKVIKRKR LRRRQHKSIA TTIRSPIQTK A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
