YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0305890, Tom...
Organism: Drosophila melanogaster
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0305890, Tom....

Description E-value Query
Range
Subject
Range
gi|6636407 - gi|6636407|gb|AAF20172.1|AF165113_1 membrane import protein [Drosophila melanogaster]
373.0 [0..1] [344..1]

Back

Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNVLAASSG APGSGASNLG LGLQEPAPLP SNSGSLTESS SSAEGLDSLA AAKDAALENP  60
   61 GTVEELHKKC KDIQAITFEG AKIMLNKGLS NHFQVSHTIN MSNVVPSGYR FGATYVGTKE 120
  121 FSPTEAFPVL LGDIDPAGNL NANVIHQFSA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLRCKFASQI QESKVVASQL TTDYRGSDYT LSLTVANPSI FTNSGVVVGQ YLQSVTPALA  60
   61 LGSELAYQFG PNVPGRQIAI MSVVGRYTAG SSVWSGTLGQ SGLHVCYYQK ASDQLQIGAE 120
  121 VETSLRMQES VATLAYQIDL PKANLVFRGG IDSNWQIFGV LEKRLAPLPF TLALSGRMNH 180
  181 VKNNFRLGCG LMIG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle