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View Structure Prediction Details

Protein: Pdp-PA, FBpp0298274
Organism: Drosophila melanogaster
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pdp-PA, FBpp0298274.

Description E-value Query
Range
Subject
Range
gi|125982780|ref... - GA11438-PA [Drosophila pseudoobscura], GA11438 [Drosophila pseudoobscura pseudoobscura]
gi|54643469, gi|... - gi|54643469|gb|EAL32213.1| GA11438 [Drosophila pseudoobscura pseudoobscura], gi|125982780|ref|XP_001...
361.0 [0..1] [475..1]

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Predicted Domain #1
Region A:
Residues: [1-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKFVLNDAA SYVRSNVREF SLNALRLLPQ LPQLSPYDVN LVLRENEFVY NFPVDGVIRS  60
   61 YETNQLGSNW PCEDSRTEAS FLHRNGFICG IFDGHAGAAC GQVVSKRLLR YVSAATLPRQ 120
  121 VLREQMKQGA DSQSFLKCHN DNVDFVSMIK PMYEASFLKY VNQLLETPQR DVSSELVNAF 180
  181 LQLDEEISQE ALTSNDVRTM NVALSGAVAC LVHIEGLQMH VASTGDCGAV LGVLDPQTQQ 240
  241 WHSKKLNIEH NADNMSEVRR ILAEHPKEEH ETVIRNGRLL SQLAPLRAFG DFRYKWSQEI 300
  301 MQQKVLPMFG VQAMAPNYYT PPYLTARPDV QQHELGPNDK FLVIASDGLW DFLPPSEVVS 360
  361 LVGEHINSKK ILEPMRLPEG DTTLQEISQQ LAERKAGLTR KPVDQNAATH LIRHALGGTD 420
  421 YGIEHSKISY YLTLPRDAVR LYRDDITITV IYFNSEHIAK LHSDVDQTEV TAPVA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.39794
Match: 2pnqA
Description: No description for 2pnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle