| Protein: | CG12796-PA |
| Organism: | Drosophila melanogaster |
| Length: | 371 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12796-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
286.0 | [0..27] | [354..1] |
|
Region A: Residues: [1-371] |
1 11 21 31 41 51
| | | | | |
1 MAFTSSSSPA WDYRSSPEAL GVVPFLWQHQ NATETPTEIT LQATSFGAGH LLWLAINAFL 60
61 FVLILGGNIL TIVAVRTCRH LRSVISNLFI LSLAVSDFCV GLALPYHLVF YMGSDIGAMR 120
121 GPCLLRFFLL ICACCVSMLT LISIAVDRYI AVVYALHYRR YMTRRVAYSI IIFNWCLGAL 180
181 VALLPVFWNR WPDAQACEFD EVLAPGYIAG VITPGFVIIW ICMFLVYWRI MREASKQALR 240
241 LRQSVVYNTD EATTMRNLLL HPDWKSVQIV VFIMGCFTLC WLPYFCVAIA QLFSICQSSS 300
301 MIYKTTFSLA IANSALNPII YSWKNSGFRR AFVQTLCCRT ARQCEDQLPA DSKHRMEATS 360
361 SSQEIKPKAT Q
|
| Detection Method: |  |
| Confidence: | 40.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
