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View Structure Prediction Details

Protein: CG3198-PA
Organism: Drosophila melanogaster
Length: 438 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3198-PA.

Description E-value Query
Range
Subject
Range
gi|76652552 - gi|76652552|ref|XP_615134.2| PREDICTED: similar to Luc7 homolog (S. cerevisiae)-like isoform 1 [Bos ...
191.0 [0..3] [236..5]

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Predicted Domain #1
Region A:
Residues: [1-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDAARQMLD ELMGRNRNLH PSEAGAKVNW EDPEFCQFYN VKFCPHDLFI NTRADLGPCA  60
   61 RIHDEEARHL YEDARPSQRK RQYEDEFLRF CNVMLHDVDR KIQKGKQRLL LMQRDQPNVP 120
  121 APLSRHQEQL ANLTARINKL LSEAEEAGIR GDVDQAQDLM TVCEELKEEK EQLVQQYEAH 180
  181 HKAISSISLT KSAEDELQHH PRSSPVTNPS EESPTTPLPA ATTLDEAPDA APSSAQAAVT 240
  241 TTDDAGEAAG AASEDKTSEK TDSKAAGWSH DAMPEKQMKV CEICGAFLIV GDAQQRIEDH 300
  301 LMGKQHLGYS KLRNAVAEIN EARQKEREQE ERRRREGRVQ RFHSYDSRRE PRSEYRERSR 360
  361 DYVQNRQPSD RRHHHHKSHH SSHHSYSRSG GGGGGVGVGG GGGGGSSRSN RSHHNHNHNH 420
  421 YRHDSRERHC RSRSRSRY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.30103
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle