| Protein: | CG3823-PA |
| Organism: | Drosophila melanogaster |
| Length: | 295 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3823-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
270.0 | [0..3] | [294..25] |
|
|
261.0 | [0..3] | [295..18] |
|
|
254.0 | [0..3] | [295..18] |
|
|
253.0 | [0..3] | [295..42] |
|
Region A: Residues: [1-295] |
1 11 21 31 41 51
| | | | | |
1 MVHLNEKAED QLMTTRISDL QDWLQAQPQL PQNISRLLLR RFLHTTRGDL SAAQRLLELN 60
61 YGLRNKHAHI FIDRDPLDAS SQQLLQVADL VPLPGLTPEN NKLLFYRLID FDADKFNFTA 120
121 AIKVFFMVAD CRFATENEER LSDGEIPVFD MAGYTLRHLT KTALGALRVY MKFVQEAHPV 180
181 RLKEIHVLNC PSYVDKVMAV VKPFIKGEVF KLIHFHLPNA DTPYRHFPRS MLPEEYGGEA 240
241 GKMSDLKLQW MQLLKEQRDY LMDTENWQIN KIKKNGQRKS SDSGVTEGLR SLEID
|
| Detection Method: |  |
| Confidence: | 54.69897 |
| Match: | 1oipA |
| Description: | The Molecular Basis of Vitamin E Retention: Structure of Human Alpha-Tocopherol Transfer Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| vitamin E binding | 7.60287756659728 | bayes_pls_golite062009 |
| retinoid binding | 2.55932836548393 | bayes_pls_golite062009 |
| isoprenoid binding | 2.50048436206147 | bayes_pls_golite062009 |
| vitamin binding | 1.77103204070558 | bayes_pls_golite062009 |
| binding | 1.48494259967762 | bayes_pls_golite062009 |
| phosphatidylinositol transporter activity | 0.754580529725379 | bayes_pls_golite062009 |
| retinal binding | 0.646905718502968 | bayes_pls_golite062009 |
| phospholipid transporter activity | 0.48474525678945 | bayes_pls_golite062009 |
| protein binding | 0.408110742195811 | bayes_pls_golite062009 |
