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View Structure Prediction Details

Protein: Btd-PA
Organism: Drosophila melanogaster
Length: 553 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Btd-PA.

Description E-value Query
Range
Subject
Range
gi|125982423, gi... - gi|54643402|gb|EAL32146.1| GA17549-PA [Drosophila pseudoobscura], gi|125982423|ref|XP_001355090.1| G...
372.0 [0..1] [524..1]

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Predicted Domain #1
Region A:
Residues: [1-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIQLSFLL LSVLFSSSHQ LSKPEDPTYT AAVVEHSQPV GDSPRARTTS ASESFQKIIR  60
   61 EVGDVDIIVF PEHILNSQAT ATFVPHESQN ITPCYQTDYE LFLIELSCSA RANHLYVVIN 120
  121 VVEKELCAHG AGSDTYNPCP SSGVRYFNTN VVFDRRGRIV SRYRKTHLWR HEYVSTSVLR 180
  181 SPDISIFRTD FGVTFGHFIC FDMLFYDPAM KLVKEHKITD IVYPTYWFSE LPFLGAVQLQ 240
  241 EGWAFGNDVN VLAADASNPD GRTSGSGIYA GRGGRLVAEI FEQPTTKLLI AEVPKREHGQ 300
  301 LAPTFTPIFE PQRKTQRLTG LATYRDNNVD IFESELLDDD FLSFERQLCH GSFCCTFSIE 360
  361 RKVTSAAENE LPSSGAKSYR YRIGVYW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.69897
Match: 1emsA
Description: NIT-FHIT fusion protein, C-terminal domain; NIT-FHIT fusion protein, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.77860354143005 bayes_pls_golite062009
catalytic activity 1.64442398754697 bayes_pls_golite062009
binding 1.34662244603439 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.472813950465394 bayes_pls_golite062009
protein binding 0.399526580105167 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [388-553]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNETTVIGVD RTEQATCALF ACTDVRLASC GYIYPENEEV INTHHFTKLS ISGNFPAAPR  60
   61 GRRLIMPSSL NALFLPVSVS DYEWIESPEA ANNLDKTILV DLKLAKAQND LLTFAIWANY 120
  121 YTDIPSTHNL DHMQPNGTQS NPSTSASSTV SAFWILCVLN CFISVL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle