YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0298289, rux-PA
Organism:	Drosophila melanogaster
Length:	335 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0298289, rux-PA.

Description	E-value	Query Range	Subject Range
gi\|2133663, gi\|6... - gi\|639484\|gb\|AAA61580.1\| rux, pir\|\|A54458 G1 progression negative regulator Rux - fruit fly (Drosop...	612.0	[0..1]	[335..1]

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Predicted Domain #1

Region A:
Residues: [1-205]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPEEHKET PLEVIHEFIN GVDDGTIRRD LGEDCILSFY SRNVRGAKAI TGFLRNQLTM  60
   61 RYKHEGFEEA AQIEWGDELL LKARFGRSFD SERRRIYEEK ERTGTTLHVR PESDDEEVNE 120
  121 KFSSTLITPP RPSSYNLNSL KYVEACGLLN KRNEHIYGGL DMGESCAVHL TLGYRSTFLP 180
  181 GGQVSGFEIC LAVYDRGLTS LKRST

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [206-335]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIPPLCSISF ARRASARCNP TTDDEEDTEE DSTPPTARRC VRRTLFTEEN TQKEEDADFI  60
   61 PVVEQEQPAP QEQPAPQQAE ETGEVVIPVD ISTALKTTNF SSCTPRKRQQ ATNGNEVVRK 120
  121 RATGPRRMRF