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View Structure Prediction Details

Protein: CG15765-PA, FBpp...
Organism: Drosophila melanogaster
Length: 873 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15765-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
309.0 [0..115] [871..1091]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRPRCLVSF LGICLVISLG MRCDARAVNV SNTWTMPQEG LNVFYRFFRD RISWFEADAV  60
   61 CQFHHANLVT VDNSFQFDAT RDLLRELDVN DIVWIGLMRP QNSDRFMWSN SRPLVADTGY 120
  121 WAESLPLMDA PLCAVIDPIR DYRWHALRCG GPETASFLCE MPVPSWAD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.39794
Match: 1litA
Description: HUMAN LITHOSTATHINE
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [169-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ACILKDMPNL TMQYMADTAS IELIRNCQEE GLLRHTCKGK EDRERAIRQL ICPKERLEAQ  60
   61 RINDITNSHF KSLQIINNIH TDNKENNDID LLPNYGRRSG MAINIEVAPP VPPVSVPGLG 120
  121 ELMQADAPGA VSLSGLYRIP DLVPKPVKKA AKKVITPDF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [328-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKKLQGSHQQ QHNQQQQQQQ QQKSRKSLVH QHEEELMMGD QPALSEEQLP PGMGMGLGIR  60
   61 MPLNEDDSNS DASNEIFEHL PHKKKILPQD LRTMAPIPEA KSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [431-578]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AMTTTTLKTT TLATPATATT TTPATTTTAT AATEVVTTPK AVDTTSSQAP ATTTRPTTTV  60
   61 RTTTITTTTT TATTTPKTEE TTTTTTKKPE PTTMVAPRTT KTSAIEAAAA AAAAAAATGT 120
  121 TTVATSAETP TTTTSTAAAA TATTTSHA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [579-671]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPTDKSNSNN MAHPIHPSQQ QHHQQQQILH EGATLQQQHA THVNESADNT RFIPPMLLVK  60
   61 SHYVPPAKHA SEHATTTTRA TTTSSTTTAA ATA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [672-873]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTPAAAAAET STKVEVQPST VTSSKELTAA TAAATTSAAT VADTVATSTV TATTGAAVEV  60
   61 TTSVKVTEDT AATSAATVIA SEAPPAAAAT TTATRAAAAN EIKSNATAAA ATTTAAATTT 120
  121 TSIPKPVREF RYPRVNQGSF KVDNNGMGSP EEEEEDEEGH LKTEAATTRH NFLEETEAPF 180
  181 KPNRRRSLTK PETVSYFKKI LG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle