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View Structure Prediction Details

Protein: Cpr5C-PA
Organism: Drosophila melanogaster
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr5C-PA.

Description E-value Query
Range
Subject
Range
gi|91079648 - gi|91079648|ref|XP_968350.1| PREDICTED: similar to Cuticular protein 47Ef CG13214-PA [Tribolium cast...
129.0 [0..48] [139..78]
gi|112983758, gi... - gi|12862591|dbj|BAB32481.1| cuticle protein [Bombyx mori], gi|112983758|ref|NP_001036866.1| cuticle ...
126.0 [0..1] [145..1]
gi|119114027, gi... - gi|119114027|ref|XP_318997.3| ENSANGP00000014755 [Anopheles gambiae str. PEST], gi|116118219|gb|EAA1...
124.0 [0..45] [138..121]
gi|45445693, gi|... - gi|45552587|ref|NP_995817.1| cuticular protein 47Ef, isoform B [Drosophila melanogaster], gi|4544569...
117.0 [0..37] [139..120]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFKFVALLA LIAAASAGVL PAGQLYHAAP VATYAAPAPA AVLKTVAQPV LAKADEEYDP  60
   61 HPQYKYAYDV QDAISGDSKS QVEERDGDVV RGEYSLVDSD GFKRTVQYTA DPINGFNAVV 120
  121 NREPLVKTVV KTVAPVAPVY AAYHH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.455932
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.842 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle