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View Structure Prediction Details

Protein: gi|62484202, gi|...
Organism: Drosophila melanogaster
Length: 840 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62484202, gi|....

Description E-value Query
Range
Subject
Range
gi|74002063 - gi|74002063|ref|XP_545015.2| PREDICTED: similar to CG4041-PA isoform 1 [Canis familiaris]
467.0 [0..32] [839..29]

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Predicted Domain #1
Region A:
Residues: [1-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTREREREC RLCAVTFFAK LHPGDVCGSN GLPLTPNSIA ILGRAQKLKE LQDEHLCQYL  60
   61 DVIRGKHERT IVVSEYLGLS LEDYAMRHPP LAIAQILRIF YQVACGINVL SRHHLVAHNV 120
  121 EPKHILLSSD GQRVKLFNYG LHHMTKGGAY VPFPIGNIRY MAPERLLGLN GNVKSDVWSL 180
  181 ALVMVELILQ IELWPKLKLS NVVRKILAFG KSNGALEKIA REHQCHERYV QMDQRLRQLL 240
  241 ESCLSVLPKR RPLPGELLEH PIFEEVLLDL KKQKMQPLSP ETEHLPLLLR CPLSQIYHLW 300
  301 QLAGGDVQAE LKKEGLIRSE APILGLPQIV RLSGASVCPG RSQAQLMDDR VVPLRLKALL 360
  361 QRLSGLPAAV YFPLLHSPRF PAHFARELQE LPLVIREKDI EYQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.045757
Match: 1koaA
Description: TWITCHIN KINASE FRAGMENT (C.ELEGANS), AUTOREGULATED PROTEIN KINASE AND IMMUNOGLOBULIN DOMAINS
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [404-699]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FQRVRLFARL LQGYPHTAEQ LQREAAVDVP PLLRGPIWAA LLEVVPNGSY AKIDKFTSTS  60
   61 TDRQIEVDIP RCHQYDELLS SPDGHRKLRR LLKAWVTAHP QYVYWQGLDS LTAPFLYLNF 120
  121 NNEELAFLSL FKFIPKYLQW FFLKDNSAVI KEYLSKFSQL TAFHEPLLAQ HLASISFIPE 180
  181 LFAIPWFLTM FSHVFPLHKI LHLWDKLMLG DSSYPLFIGI AILRQLRSTL LTSGFNECIL 240
  241 LFSDLPDIVM DGCVLESQKM YEATPKSITH RQHALRLQPP QALDIGVADV ELKHLQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.09691
Match: 2qq8A
Description: No description for 2qq8A was found.

Predicted Domain #3
Region A:
Residues: [700-840]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEQCPRISAK DVQFLLDNSP AELALIDLRS VVEFGRVHVP HSINIPFATV QLGEQRLEAL  60
   61 QVPQLEAQLR GKIVVCVSNI HQHSVEVGHP LAQLKLLCKL KSFPISQFSH FLVACGVQRT 120
  121 CILHKGFNVL HSIEPNILIS N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle