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View Structure Prediction Details

Protein: CG15570-PA
Organism: Drosophila melanogaster
Length: 1357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15570-PA.

Description E-value Query
Range
Subject
Range
gi|150017446, gi... - gi|82746773|ref|ZP_00909277.1| conserved hypothetical glycine-rich protein [Clostridium beijerincki ...
365.0 [0..206] [1356..398]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRLHLFLLL STCFLVPHDA KPTKRSPVGF SSTTLVSLLL ETETGNGTTD VPTTTETTTL  60
   61 RTQRVTNIGR LASKDLADLL LASMQARGAK LTSSQESTMK SLRTEEGKDT KGNNVFLQIG 120
  121 MDVIIDILIG ARDNATCGRI IQDIDQSQDR NTLTLTLKSF LALCVFNGIE CAKDEVSQVI 180
  181 KSTHFRQKQQ IKIVHDDNDH QQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [203-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGSGLRTAR RVGVIKDDRN SVLKFLQARN IKELSTILNT LLKLCGA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [250-494]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGGEAHKIIR NLREMGPDNV SLLQVNAFSM LSVSLLDSLS TIAEGKISGL CSASPESWIV  60
   61 RLLAMGVDKV VLMGLMTALD RTIVNSSSAE MTNAAALNSI NGGDFSNSKS KVDQKTAAKR 120
  121 AILDSGSGND FNLAPSVEEI GNLNTVNDLI NANVPVGANL PVLSTIDGSS SSGNTLNQSS 180
  181 DVVLDGDSNN FNRLVGAKIP VLANAPILSN INGGSGSGGV GNNFNLAPSV QEIGDSNTVN 240
  241 DLINA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [495-734]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVPVGASLPV LSSIDGSGFS GNTLNQGTDV LVNGTGNTFN RLVGARIPVL ANAPILSSIN  60
   61 SGSSGTSGSS SSGSSSSGSS SSSSGSSSGV GNNFNLAPSV QEIGDSNTVN DLINANVPVG 120
  121 ASLPVLSSIT GSGFTGNTLN QGSDVLINGT GNTFTRLVGA RIPVLANAPI LSSINSGSSS 180
  181 TSSGSSSSGS STSSGSSGSS TSGSSGSGST SSSSGTPSSS GSSVLGNNVN VKGDTITGNK 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [735-827]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFLFKLLDLG LPISLAAPVL SIINQGSSTG SSTGSSTSSS TGSSTGTSSG SSTGSSSGSS  60
   61 GVTSTGSSNS TSSGASVGNN ANIDPSVDIV GNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [828-1054]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQVTKVVDAN VDALANVPVL SKITGTGFAN NLNQKSNVLI RGDNNTVTKV VDANVPVLAA  60
   61 VSALSSITGK SSGSGSSSGS SGSGSSSGSS GSGSSSGSSG SGSSSSGLLS GLTGSSGSSS 120
  121 DGLLGGVLGG VVPVVGEVVG DVVQAVGPVL GGVLNTVEPV LGGVLNTVEP VLGGVLNTVE 180
  181 PVLGGVLNTV EPVLGGVLNT VEPVVGDLVG GVLSGVTGSS SSSSSSL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1055-1220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGVTNLLGGS SSSNGSSSII GNSASSGANT LITGNNNNIV RLVDVNGLVL ADIPILSSIT  60
   61 NLLGVTGLIG NSANKGPKTV VIGDNNRIVK LINVDLWVLA FLDVLNIVRG SGGVCNQLNS 120
  121 GPNTEIIGNN NDVVQLVDVD LSVLLVVDLL SHLITNVAND CSGKTT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1221-1357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVAPTQSPTE SPTESPTGSP TDSPTQSPTE TPTYGPPTNE PPTNQPPTNQ PPTVQPPTNQ  60
   61 PPTNQPPTNQ PPTNQPPTNQ PPTNQPPTNQ PPTNEPPTNR PPSPSPNNCY RRYCRKWRTR 120
  121 PSYLCYKNCG GAFVYKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle