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View Structure Prediction Details

Protein: CG6133-PA
Organism: Drosophila melanogaster
Length: 746 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6133-PA.

Description E-value Query
Range
Subject
Range
gi|114598922 - gi|114598922|ref|XP_517620.2| PREDICTED: NOL1/NOP2/Sun domain family 2 protein [Pan troglodytes]
612.0 [0..21] [739..27]

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Predicted Domain #1
Region A:
Residues: [1-673]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRNQKQNFF AARKRQKREN GPKRTDRQAQ PYEEIKRDNA FFIKYYQLQK ICATDEEWTQ  60
   61 FLASIRDNLP TTFRVTGFKD EAKALLSIIE TQLFTEYVRA VAELHQKAPE DVERPLCLPW 120
  121 YPNGLAYQLH LTRKDIRRSE PLYRLHNFLI VETTAGGISR QEAVSMIPPI VLDVRPTDKV 180
  181 LDMCAAPGSK TAQLIEALHA APEEHKIPPG FVLANDVDNN RCYMLVHQAK RLNSPCLLVT 240
  241 NHDSSVFPNL VTTKPDGSKA ILKFDKILCD VPCSGDGTLR KNPDIWLKWN LAQAYNLHGI 300
  301 QYRIVRRGAE MLEVGGRLVY STCSLNPIEN EAVLQRIIKD ADGALELVDA GHLVPGLKYK 360
  361 PGMTDWKLAT KEVDQIFTRF EEVPESLHTI IRPGMFPLPA DEMAKIGLEK CLRVLPHLQD 420
  421 SGGFFVAVLE KRRQLSFEKN DVVELVKLNE TAKQPAAEPQ VDADGKPIEE KSVPWGPQRK 480
  481 KRRLHGYKED PYVFFGENDP DYQAIKEFYQ LDESLSQRCL LTRCVTEKKK NIYYCSEPIR 540
  541 DLVLNNENNI KIINTGVKTF VRCENRHTVH PFRLAQEGLQ TSNAFMGASR RIQVEREDLV 600
  601 MMLNCTDPTQ PPSTHELKKE TQERCKELGV GSCILKYVDQ RFTLYTVGWR GTSSLRAYVQ 660
  661 KDETIHILRL LGA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.39794
Match: 2frxA
Description: No description for 2frxA was found.

Predicted Domain #2
Region A:
Residues: [674-746]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLSKFETNKY EDARVAAAAA ADAEVGKSAE AEADSSGDGD ATESTFSGSG AIDVTVAAET  60
   61 TGTPMDTEVV ATS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle