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View Structure Prediction Details

Protein: brn-PA
Organism: Drosophila melanogaster
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for brn-PA.

Description E-value Query
Range
Subject
Range
gi|109042996, gi... - gi|109042996|ref|XP_001106444.1| PREDICTED: similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosami...
CCDS3244.1_1 - null
257.0 [0..1] [324..1]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSKHRKLLL RCLLVLPLIL LVDYCGLLTH LHELNFERHF HYPLNDDTGS GSASSGLDKF  60
   61 AYLRVPSFTA EVPVDQPARL TMLIKSAVGN SRRREAIRRT WGYEGRFSDV HLRRVFLLGT 120
  121 AEDSEKDVAW ESREHGDILQ AEFTDAYFNN TLKTMLGMRW ASDQFNRSEF YLFVDDDYYV 180
  181 SAKNVLKFLG RGRQSHQPEL LFAGHVFQTS PLRHKFSKWY VSLEEYPFDR WPPYVTAGAF 240
  241 ILSQKALRQL YAASVHLPLF RFDDVYLGIV ALKAGISLQH CDDFRFHRPA YKGPDSYSSV 300
  301 IASHEFGDPE EMTRVWNECR SANYA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.39794
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle