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View Structure Prediction Details

Protein: FBpp0309962, CG6...
Organism: Drosophila melanogaster
Length: 788 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309962, CG6....

Description E-value Query
Range
Subject
Range
gi|17946316 - gi|17946316|gb|AAL49198.1| RE63452p [Drosophila melanogaster]
778.0 [0..1] [788..1]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEPSDDENS EPTPKKIKRE WVKSYSNKAM EMMKKMGYEN DKGLGKSNQG RLEPIIAVQQ  60
   61 DGRRGFGLKL DTVQSSAGQW DPACEELEIP EPVLWLHNPG SRADAYSLDQ LMGHLVTGEK 120
  121 KLTLDGETRY CDPAILHHIL NAKTVFDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [149-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNDNEKRRAR SRCNPFETIR SSIFLNRAAV KMANIDSMCN FMFTNPRDPA GQTLVAPDEL  60
   61 LYFTDMCAGP GGFSEYVLYR KSWEAKGFGF TLRGANDFKL EKFFAASPES FDTFYGVKED 120
  121 GNIFDESNQD SLNEYIRMHT PQGVHFAMAD GGFSVEGQKN IQEILSKQLY LCQFLTALKI 180
  181 LRPNGSFVCK VFDLFTPFSV GLVYLMYKCF QQIAIIKPNS SRPANSERYL VCKYKRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.522879
Match: 1eizA
Description: RNA methyltransferase FtsJ
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.857347609112816 bayes_pls_golite062009
transferase activity 0.769739415230943 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.648175251543522 bayes_pls_golite062009
methyltransferase activity 0.646052703874729 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.00827854656426392 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [386-537]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAETAGIVAY LNTVNLMLSD ESQLDENDVL EIFNANELAE DEDFLRYIID SNNAIGKKQI  60
   61 VGLRKIAAFA QNLELKETKQ SEVRQECLKR WGLPDKLRQA PENKPTDRLL DELLADWANE 120
  121 RSWLSLPATE MKGVASLNAT IKNVADWYFV PV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [538-638]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GREETNINAC SLFLCKSRGN LLRYTEHKKW ELVETAFEVQ PRSIFFGQIV YEFYGEGRTI  60
   61 QRMAALHIID GICLGGVDIR RRPYRERVSM CDKFARSLNK P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [639-788]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YRKDRTFGAL RSKPLFRLQD MGSFFANMRH YVLKDNSQRL GFALDDNKFF VPGGIMMFCE  60
   61 LTNNYVSAHS RSRGQLYYFN VRNKESYYKD QIPRNKADEI FASFRFSFSC RLLWKWTDLR 120
  121 QVEELATEDN PKILFRSDFV KFIADKLGHS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle