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View Structure Prediction Details

Protein: CG6428-PA
Organism: Drosophila melanogaster
Length: 631 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6428-PA.

Description E-value Query
Range
Subject
Range
gi|115746587 - gi|115746587|ref|XP_780674.2| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpuratus...
627.0 [0..5] [631..30]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIPVLKTNG HERLASLDKS MPPASPTLPS PTIRRNKSDG KLMAQDVKEA RVKVIYTGGT  60
   61 IGMVRNERNV LAPIPNALVR SIRKYPNIHD EEYALRRFGA SASMAPLVLP IVQGVDRRVI 120
  121 YQISEYTPLL DSSNMTMNDW ARIASDIQQS YEFFDGFVVL HGTDTLSYTA SALSFMLENL 180
  181 GKTVIITGSQ IPIFETRTDG KDNFTSALII AGNYIIPEVC IFFGHKLMRG NRTVKVSSNA 240
  241 LDAFDSPN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.522879
Match: 2p2dA
Description: No description for 2p2dA was found.

Predicted Domain #2
Region A:
Residues: [249-631]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPPLARIGID VNVDYRLIFR PCTIERFCVH LNLDENVGLL RIFPSISHST FRAFLAPPIR  60
   61 GVVLQSFGSG NIPSNRKDLI DELRAAGERG VIIINCTQCP NGTVAEIYDT GKVLCDVGVI 120
  121 PGFDMTPEAA LAKLAYVIGK EEWSLDMKKQ MMQSSLRGEL TSLKAPKMED YDLVDAVARS 180
  181 LHLSSPQELD QLGETLFPAM INAAVAEGDP KKINNLKAYG ADLSGTNHDQ RTALHLACQL 240
  241 GNVEIVKYLL QNGVSVHVRD RYDRTPLLEA VATDSHEIIQ LLINCGAHLT GSSRAVGEQL 300
  301 CAAAARGSMI RLKSYQYAGA DLAQSDPSGR TALHVAALHG FPEVVQYVLP YFENPNEKDM 360
  361 LGLTAMDYAE RGGHAAVMEV LKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.30103
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle