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View Structure Prediction Details

Protein: CG10802-PA
Organism: Drosophila melanogaster
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10802-PA.

Description E-value Query
Range
Subject
Range
gi|75241640, gi|... - gi|75241640|ref|ZP_00725477.1| COG0013: Alanyl-tRNA synthetase [Escherichia coli F11], gi|191171366|...
412.0 [0..8] [420..456]

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Predicted Domain #1
Region A:
Residues: [1-55]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFKCQEDSF LKEFKTKIVS SEFATLDWTD PSGKVEKLKG FNVICEDTIL FPEGG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 2e1bA
Description: No description for 2e1bA was found.

Predicted Domain #2
Region A:
Residues: [56-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQPCDYGTLG GFPVKNVQRK GSTAVHFVES PTSFEQDAEV LLTLDYQRRL DHMQQHSGQH  60
   61 LITALFDREF KYDTTSWSLG STVSYIQLST PHLISRESLD LIERQANDLI REGREVTVLL 120
  121 VDPEVAQEFQ DARAPRGLPK DHEGLARVVR IEGIESNMCC GTHVTNLSQL QCIKLLYAEK 180
  181 VKANVLVHFV VGERVLVKLG EVFQREQQLT QALKGGPGQH LELVQKLQQN VKGSRKYFQQ 240
  241 LLKRYATAEA ERLCDLPKKD RPKYFSLHRR DGIEVDFINT FLRAAPEGIF YFLTVSESVF 300
  301 AGSSAKGHLV LRGDPEIVGK LGPQFMEILE GKGNGKEDNF QGKINNLARL QECQELLEAE 360
  361 FKPKRIIEAA PANGAQLEAE E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.154902
Match: 1qf6A
Description: Threonyl-tRNA synthetase (ThrRS), C-terminal domain; Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain; Threonyl-tRNA synthetase (ThrRS), second 'additional' domain; Threonyl-tRNA synthetase (ThrRS)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle