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View Structure Prediction Details

Protein: Csat-PA, FBpp0311754
Organism: Drosophila melanogaster
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Csat-PA, FBpp0311754.

Description E-value Query
Range
Subject
Range
gi|92872427, gi|... - gi|92872427|gb|ABE81054.1| Protein of unknown function DUF6, transmembrane [Medicago truncatula], gi...
145.0 [0..1] [342..3]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSIHMNANT LKYISLLTLT LQNAILGLSM RYARTRPGDI FLSSTAVLMA EFAKLITCLF  60
   61 LVFNEEG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDAQKFVRSL HKTIIANPMD TLKVCVPSLV YIVQNNLLYV SASHLDAATY QVTYQLKILT  60
   61 TAMFAVVILR RKLLNTQWGA LLLLVMGIVL VQLAQTEGPT SGSAGGAAAA ATA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.18
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [181-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASSGGAPEQN RMLGLWAALG ACFLSGFAGI YFEKILKGAE ISVWMRNVQL SLLSIPFGLL  60
   61 TCFVNDGSRI FDQGFFKGYD LFVWYLVLLQ AGGGLIVAVV VKYADNILKG FATSLAIIIS 120
  121 CVASIYIFDF NLTLQFSFGA GLVIASIFLY GYDPARSAPK PTMHGPGGDE EKLLPRV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle