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View Structure Prediction Details

Protein: CG3071-PA
Organism: Drosophila melanogaster
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3071-PA.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
546.0 [0..2] [509..1177]

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Predicted Domain #1
Region A:
Residues: [1-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNSFLPLNT RRFRQRAQVE TPDTVYWDRL AKPELLKEHN TIDYLDFSPS DPDNFVVTCS  60
   61 VRVQIYNLVT MLVVKNLSRF QKTAYGATFR QDGRLLAAGD EEGHVKLFDT TSRNILRLFK 120
  121 GHTAPVHRTF FTADKLQLAS FGDDKSVRLW DVANEKVVQT YEDTHTDYVR AGAMHPQAGH 180
  181 MFVSGGYDGK IKLYDTRAET AVQRTLDHGA PVESMLFLPN GSIFVSAGGS QVRVWDLISG 240
  241 CRLLTMMSQH HKTVTCLRLG SDGRRLLSGG LDRHVKIYDV STYKTVHTLT YPNAVVSMAV 300
  301 ADGDQAVVAG MVDGLVSIRR MMVDSKPSHL KKIRADRARK YFVSTKRTNN TQEVDHTIKD 360
  361 HV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.221849
Match: 2ovpB
Description: No description for 2ovpB was found.

Predicted Domain #2
Region A:
Residues: [363-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGPGLKSYDV HLRQFNHKKA LDDVMNAQKM QYQPELIVAV ITDLLHRGSL GKALTGRHEA  60
   61 ALVRFIDFIC NHLGEVRFMR PLMMAASTVL DVFE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.221849
Match: 2ojhA
Description: No description for 2ojhA was found.

Predicted Domain #3
Region A:
Residues: [457-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QRLVAYSQKL MKALQRLSLA MQEEVRLTAE LMRMKGAVDM LIGISMDNSE VAHKPTYVET  60
   61 KTPKMHPSVA AQNYVVLVE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle