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View Structure Prediction Details

Protein: Or2a-PA
Organism: Drosophila melanogaster
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or2a-PA.

Description E-value Query
Range
Subject
Range
gi|2661571, gi|7... - pir||T13426 hypothetical protein 30B8.7 - fruit fly (Drosophila melanogaster), gi|2661571|emb|CAA15...
210.0 [0..1] [379..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKQEDFKLN THSAVYYHWR VWELTGLMRP PGVSSLLYVV YSITVNLVVT VLFPLSLLAR  60
   61 LLFTTNMAGL CENLTITITD IVANLKFANV YMVRKQLHEI RSLLRLMDAR AR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVGDPEEISA LRKEVNIAQG TFRTFASIFV FGTTLSCVRV VVRPDRELLY PAWFGVDWMH  60
   61 STRNYVLINI YQLFGLIVQA IQNCASDSYP PAFLCLLTGH MRALELRVRR IGCRTEKSNK 120
  121 G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [234-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTYEAWREEV YQELIECIRD LARVHRLREI IQRVLSVPCM AQFVCSAAVQ CTVAMHFLYV  60
   61 ADDHDHTAMI ISIVFFSAVT LEVFVICYFG DRMRTQSEAL CDAFYDCNWI EQLPKFKREL 120
  121 LFTLARTQRP SLIYAGNYIA LSLETFEQVM RFTYSVFTLL LRAK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle