YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0309795, CG3...
Organism:	Drosophila melanogaster
Length:	103 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309795, CG3....

Description	E-value	Query Range	Subject Range
gi\|17946507 - gi\|17946507\|gb\|AAL49285.1\| RE75088p [Drosophila melanogaster]	186.0	[0..1]	[103..1]
gi\|194108736, gi... - gi\|195168924\|ref\|XP_002025280.1\| GL13321 [Drosophila persimilis], gi\|194108736\|gb\|EDW30779.1\| GL1332... gi\|54643536, gi\|... - gi\|54643536\|gb\|EAL32279.1\| GA17565 [Drosophila pseudoobscura pseudoobscura], gi\|125982914\|ref\|XP_001... gi\|125982914\|ref... - GA17565-PA [Drosophila pseudoobscura], GA17565 [Drosophila pseudoobscura pseudoobscura]	165.0	[0..1]	[103..1]
gi\|30178919, gi\|... - gi\|31198369\|ref\|XP_308132.1\| ENSANGP00000017196 [Anopheles gambiae str. PEST], gi\|30178919\|gb\|EAA038...	160.0	[0..4]	[103..42]
gi\|108872558, gi... - gi\|157128477\|ref\|XP_001661446.1\| NADH dehydrogenase, putative [Aedes aegypti], gi\|108872558\|gb\|EAT36...	138.0	[0..4]	[103..5]
NDUA7_MOUSE - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Mus musculus GN=Ndufa7 PE=1 SV=3	136.0	[0..11]	[97..7]
gi\|81294173 - gi\|81294173\|gb\|AAI07893.1\| NDUFA7 protein [Homo sapiens]	136.0	[0..11]	[97..15]

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Predicted Domain #1

Region A:
Residues: [1-103]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALRRDVSP LIQRIRAFLL GREHNLALRF EDGLADRTQP QPEIPDGPSH LLSANYYCQR  60
   61 DGRREVLPPI DLVEQQKQLA AEGEAAKAPS SKLPTPGKVY AWD

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	75.958607
Match:	PF07347.3
Description:	No description for PF07347.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits